Results for "Recombination"
Bookmarks
A program to detect recombination hotspots using population genetic data. More at https://github.com/auton1/LDhot3005 days ago
Nemo – A stochastic, individual-base, genetically explicit simulation platform
A recombination map has been added for all multi-locus traits. The map positions (c...can hold an unlimited number of loci of different types jointly, at any recombination scale (cM or lower). The effe...2763 days ago
- ...of core-genome alignment and visualization tools for quickly analyzing thousands of intraspecific microbial genomes, including variant calls, recombination detection, and phylogenetic t...
2641 days ago
Harvest: a suite of core-genome alignment and visualization tools
...of core-genome alignment and visualization tools for quickly analyzing thousands of intraspecific microbial genomes, including variant calls, recombination detection, and phylogenetic t...2330 days ago
HTTDB - Horizontally transferred transposable elements database
...nsposons or Transposable elements (TEs) are "mobile genes" capable of mobilization from one genomic location to another through non-homologous recombination. As this movement is mediated...2284 days ago
jackalope: A swift, versatile phylogenomic and high-throughput sequencing simulator
...summary statistics, phylogenies, Variant Call Format (VCF) files, and coalescent simulations—the latter of which can include selection, recombination, and demographic fluctuations...1736 days ago
DnaSP: DNA Sequence Polymorphism, is a software package for the analysis of DNA polymorphisms
...tween populations in noncoding, synonymous or nonsynonymous sites, or in various sorts of codon positions), as well as linkage disequilibrium, recombination, gene flow and gene conversio...1247 days ago
ExRec: Exclusion of Recombined DNA
...conducts the four-gamete filtering procedures. The pipeline outputs recombination-filtered data in concatenated...newer approach). Two other applications in the package convert the recombination-filtered data into single-loc...29 days ago
