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• • Shreya Ganguli@shreya

  

  VI(Visual) Editor Reference manual http://glaciated.org/vi/ #Linux #Vi #Editor #Commands

  3864 days ago

• • Shikha Logwani@shikha

  

  Perl Special Variables Quick Reference http://www.perlmonks.org/?node_id=353259 #Perl

  3843 days ago

• • Neelam Jha@neelam

  

  RAMICS substantially outperforms other mapping approaches for alignment of coding DNA to reference sequences. http://hiv.sanbi.ac.za/tools#/ramics #Tools #Alignment #NGS #RAMICS

  3593 days ago

• • Jitendra Narayan@admin

  

  Ragout—a reference-assisted assembly tool for bacterial genomes http://bioinformatics.oxfordjournals.org/content/30/12/i302.short #Genome #Assembly #Reference #Ragout #Bacteria

  3522 days ago

• • Jitendra Narayan@admin

  

  Reference-free Prediction of Rearrangement Breakpoint Reads http://bioinformatics.oxfordjournals.org/content/early/2014/05/28/bioinformatics.btu360.short #Reference #Breakpoint #Reads #Rearrangement

  3510 days ago

• • Rahul Nayak@rahul

  

  Reference genomics http://www.foodqualitynews.com/Lab-Technology/Bioinformatics-platform-scoops-award #Genomics #Reference

  3373 days ago

• • Jit@jit.aber

  

  #Mapping #sequencing #reads to a #reference #genome with #Bowtie2: a step-by-step guide https://insidedna.me/tutorials/view/how-to-use-bowtie2-read-mapping

  2965 days ago

• • Jit@jit.aber

  

  Extract reference nucleotide from BAM file: samtools view your.bam | awk '{print substr( $10, 100, 1)}' #SAM #BAM #Samtools #Tricks #NGS

  2856 days ago

• • Jit@jit.aber

  

  A perl script for mapping fasta formated sequences to multiple reference sequences using one of several alignment programs. http://seq.crg.es/download/software/Miro/doc/run_Mapping.html #Perl #Script

  2760 days ago

• • Jit@jit.aber

  

  Split the bam file by chromosome. $ bamtools split -in file.bam -reference #Split #Bam #Bamtools

  2613 days ago

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