Results for "Regular Expression"
Bio-Scripts
Read lines from input file – print lines that match a regular expression
#!/usr/bin/perl use strict; use warnings; my $line; #read the line-by-line for each line ask if it matches the regex print it if it matches while($line = ){...2902 days ago
Parse a genbank file using regular expressions
#! /usr/local/bin/perl -w $genbank = "genbank_file.txt"; open (GENBANK, $genbank) || die "cannot open $gb_report for reading: $!"; # Flag for multiline translati...2902 days ago
Perl script to find coding regions in DNA sequences
...while ($line = ) { # extract the two values or columns with a regular expression # A group of letters and...sequence. To split the sequence in segments of length # three, a regular expression will be used searching for al...2140 days ago
- jitendra@jitendra-UNLOCK-INSTALL[SNP] wget https://github.com/broadinstitute/gatk/rel...Generates table of filtered base counts at het sites for allele specific expression CollectAllelicCounts...
2060 days ago
Perl script to break the contigs by 'N'
...; push(@bases,"E"); #This extra position marks the end of the contig my $n=0; #Sorry for this loop, but its less memory expensive than regular expressions for (my $i=0;$i=$minNlen)...2048 days ago
- # Reset Color_Off='\033[0m' # Text Reset # Regular Colors Black='\033[0;30m' # Black Red='\033[0;31m' # Red Green='\033[0;32m' # Green Yellow='\...
2003 days ago
- ...e node-spdx-correct node-spdx-expression-parse node-spdx-license-ids n...e node-spdx-correct node-spdx-expression-parse node-spdx-license-ids n...onic/universe amd64 node-spdx-expression-parse all 1.0.4-1 [12.1 kB]...unselected package node-spdx-expression-parse. Preparing to unpack ....
1538 days ago
Sequence Ids conversion files !
ftp://ftp.ncbi.nlm.nih.gov/gene/DATA/ Name Size Date Modified ARCHIVE/ 02/01/202...03/07/2020, 07:48:00 0 B 10/02/2012, 05:30:00 15.1 kB 30/06/2020, 23:01:00 expression/ 06/03/2017, 05:30:00 2.0 G...1387 days ago
