Results for "Resolution"

Blogs

Bookmarks

  • BreakSeq2

    Ultrafast and accurate nucleotide-resolution analysis of structural variants More at http://bioinform.github.io/breakseq2/ Download BreakSeq2 Latest version: https://github.com/bioin...

    2950 days ago

  • methylKit

    ...rom RRBS and its variants, but also target-capture methods such as Agilent SureSelect methyl-seq. In addition, methylKit can deal with base-pair resolution data for 5hmC obtained from T...

    2855 days ago

  • +18 more Bookmarks

Pages

  • Genome Assembly Tools and Software - PART2 !!

    ...sing an array of hash lengths, a dynamic filtering of noise, a robust resolution of alternative splicing event...a contig digraph. rectangles 2.0 – Rectangle Graph for Repeat Resolution in Genome Assemblyrectangles&...

    2648 days ago

Top-level pages

News

  • Atlas of ancient inter-ethnic group !!!

    ...ixing over time or between multiple groups can be difficult to tease apart. But it is believed that larger sample sizes will improve resolution. These high resolution will provide a deeper underst...

    3695 days ago

Opportunity posts

Video

  • A 3D Map of the Human Genome

    ...(of the Aiden Lab) describe a 3D map of the human genome at kilobase resolution, revealing the principles of...rez Lieberman Aiden. (2014). A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromat...

    3393 days ago

Bio-Scripts

  • DotPlot with Perl GD

    ...is the width of the plot in pixels and defines the resolution of the image....runs can be re-plotted from the existing dot file using a different resolution by changing -p -h causes t...

    2655 days ago

  • Perl script to run SATSUMA in loop !

    ...edAdinetaV2.fa"; #Ur target file my $satsumaLoc="/home/urbe/Tools/SATSUMA/satsuma-code-0"; # Location of ur SATSUMA my $maxSize = 5000; my $resolution = 5000; my $dotsize = 1; my...

    2102 days ago

Tags

  • Rectangle Graph for Repeat Resolution in Genome Assembly

    Ultimate tool for resolving repeats in genome assemblies. Though the specific implementation of the idea of the rectangle graph approach is already included into the current SPAdes distribution, we're also releasing the Rectangle Graph Module (RGM) as the separate code which can be run inde...

    Tags: Rectangle, Graph, Repeat, Resolution, Genome, Assembly

    2282 days ago

  • HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution

    Software accompanying "HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution" Preprint: http://biorxiv.org/content/early/2016/08/01/062117 Paper: http://genome.cshlp.org/content/27/5/747.full An ipython notebook to reproduce results in the paper can be found in thi...

    Tags: HINGE, Long-Read, Assembly, Achieves, Optimal, Repeat, Resolution

    2241 days ago

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