Results for "Respect"
Bookmarks
Nucl2Vec: Local alignment of DNA sequences using Distributed Vector Representation
We demonstrate a novel approach forlocal alignment of DNA reads with respect to reference genome.For this process we have used Skip-gram model for creatingencoding(Nucl2Vec) and k-nea...1136 days ago
mrFAST: Micro Read Fast Alignment Search Tool
...ral variation and segmental duplications. mrFAST maps short reads with respect to user defined error thresho...is manual, describes how to choose the parameters and tune mrFAST with respect to the library settings. mrFA...2921 days ago
FOGSAA: Fast Optimal Global Sequence Alignment Algorithm
...e) and results in an optimal alignment faster than conventional dymanic programming techniques. It is also better than the heuristic methods with respect to alignment quality.2330 days ago
Nanopolis: polish a genome assembly
...g data. Nanopolish can calculate an improved consensus sequence for a draft genome assembly, detect base modifications, call SNPs and indels with respect to a reference genome and mor...2100 days ago
Hercules: a profile HMM-based hybrid error correction algorithm for long reads
...the first machine learning-based long read error correction algorithm. The algorithm models every long read as a profile Hidden Markov Model with respect to the underlying platformtex...2075 days ago
MACSE: Multiple Alignment of Coding SEquences Accounting for Frameshifts and Stop Codons
MACSE aligns coding NT sequences with respect to their AA translation while allowing NT sequences to contain multiple frameshifts and/or stop codons. MACSE is hence the first automati...1893 days ago
- ...ner image for your R package, in which the package itself is available. The Docker image seeks to mirror your R session as close as possible with respect to R specific dependencies. B...
1585 days ago
PuffAligner: a fast, efficient and accurate aligner based on the Pufferfish index
...STAR aligner, PuffAligner requires considerably less memory to construct its index and align reads. PuffAligner strikes a desirable balance with respect to the time, space and accura...735 days ago
