Results for "Run"


  • Arvados

    Arvados is a free and open source bioinformatics platform for genomic and biomedical data. User can Store | Organize | Compute | Share the data for free. 

    Tags: Bioinformatics, Computational Biology, Big data, Analysis, Share, Run, Compute, Free, Arvados, Organise, Store

    1220 days ago

  • SLURM basics !

    SLURM is a queue management system and stands for Simple Linux Utility for Resource Management. SLURM was developed at the Lawrence Livermore National Lab and currently runs some of the largest compute clusters in the world. SLURM is similar in many ways to most other queue systems. You write a ...

    Tags: Bioinformatics, SLURM, Job, Server, Run, Cluster, Basics

    619 days ago

  • How to redirect MIRA temporary file to non-NFS mounted location ?

    I run MIRA on my dataset and got the following error. I have /tmp directory mounted on non-NFS protocol. I wanted to use it for temporary location. How to do that? Sorry, M new to MIRA. WARNING WARNING WARNING! It looks like the directory MIRA uses for temporary files /home/user/MIRA/mira_4.0...

    Tags: MIRA, TMPDIR, tmp, Redirect, Mount, Run, NFS

    257 days ago

  • Run miniasm assembler on nanopore reads !

    Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream assemblers, miniasm does not have a consensus step. I...

    Tags: Run, miniasm, assembler, nanopore, reads

    35 days ago