Results for "SAM tool"

Top-level pages

  • Bioinformatics Definitions

    "Bioinformatics is a science of biological...pment, or application of computational tools and approaches for expanding...the development and implementation of tools that enable efficient access...puter has become an essential research tool. Three key areas are the org...

    3910 days ago

  • Data Mining in Bioinformatics

    ...ta mining is becoming an increasingly important tool to transform this data into...ausal Data Mining in Bioinformatics by Ioannis Tsamardinos: http://www.forth....f Bioinformatics and Medical Informatics: Tools for Mining and Applying Gene...

    3909 days ago

  • Bioinformatics Algorithms

    An algorithm is a computable set of steps to achieve a desired result. We use algorit...of a problem to one or more smaller instances of the same problem (usually recursively...ex.htm•http://www.cse.ucsc.edu/research/compbio/sam....

    3909 days ago

  • Genomics for Bioinformatician

    Genomics is the study of the genomes of or...various conditions. The most important tools here are microarrays and bio...Genomics Tutorial: GENOME TUTORIAL: Tools and resources for identifyin... Sequin is a stand-alone software tool developed by the NCBI for sub...

    3905 days ago

  • Bioinformatics Courses Around the World

    ...programming languages and software tools in bioinformatics (I); 4. s...programming languages and software tools in bioinformatics (II); 4. m...ular biology database and analysis tools, April 6-12, 1999 (brok...bsp;  (Documentation for SAM) Technical University of Denm...

    3906 days ago

  • Useful Publications and Websites for Deep Sequencing Data Analysis

    ...ement, and alignment software tools The Sequence Alignment/Map format and SAMtools. Li et al, Bioinformatics 2...ed with a variety of software tools installed and ready to use....nment A webpage that has the same information in text form, and...

    3742 days ago

  • List of bioinformatics open source projects/software.

    ...y-foundation-evolves-into-new-toolkit-net-bio.aspx A language-neutral bioinformatics toolkit built using the Microsoft...rogramming language) language toolkit Bioinformatics Learning T...sidual Dipolar Coupling data SAM Tools Data format (SAM) and accompanying tool suite,...

    3719 days ago

  • List of generic simulation software/tools/resource with brief description and homepage !!!

    ...imulation Program. A software tool for testing and investigating...stical genetics by generating samples of family data based on us...unt.sourceforge.net/MetaSim A tool to generate collections of sy...imRNA Seq Simulator RSS takes SAM alignment files from RNA-Seq d...

    3700 days ago

  • List of In-silico Binding Site Prediction Tools

    ...nvironments either within the same specie or across different sp...ftware is available, as a web tool, free of charge for academic...gi-bin/screen2.cgi  is a tool for identifying protein cavit...xtremely efficient because it samples the medial axis of the com...

    3707 days ago

  • Perl one-liner for bioinformatician !!!

    ...mung and wrangle around massive amounts of genomics text. There are several "standardized" file formats (FASTQ, SAM, VCF, etc.) and some tools for manipulating them (fastx toolkit, samtools, vcftools, etc.), there a...

    3591 days ago