Results for "Scaffolding"

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  • Genome Assembly Tools and Software - PART2 !!

    ... (Repeat-masked Phrap with scaffolding), a WGS sequence assembler, t...s a software for assembling and scaffolding Illumina sequencing data of m...assemblies. SSPACE 3.0 – Scaffolding pre-assembled Contigs using P...d Mate-Pair reads Filtering and ScaffoldingSLIQ , a set of simple li...

    2648 days ago

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  • Genome Assembly: #Scaffolding Guided by Related Genomes https://www.duo.uio.no/bitstream/handle/10852/37431/Furenes_Master.pdf?sequence=1

    2109 days ago

  • #SSPACE Basic, SSAKE-based #Scaffolding of Pre-Assembled Contigs after Extension https://github.com/nsoranzo/sspace_basic

    2003 days ago

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  • Scarpa

    Scarpa is a stand-alone scaffolding tool for NGS data. It can be used together with virtually any genome assembler and any NGS read mapper that supports SAM format. Other features include support for multiple libraries and an option to estimate insert size distributions from data. Scarpa is ...

    Tags: Bioinformatics, Analysis, NGS, Scaffolding, Scarpa

    2815 days ago

  • WiseScaffolder

    Function WiseScaffolder is a stand-alone semi-automatic application for genome scaffolding of pre-assembled contigs using mate-pair data. It also produces editable scaffold maps, allowing either to build gapped scaffolds or usable as a common thread for the manual improvement of scaffolds. Desc...

    Tags: Bioinformatics, Analysis, NGS, Scaffolding, WiseScaffolder

    2815 days ago

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