Results for "Script"

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  • Converting BLAST output into CSV

    ...tput. Let’s conclude this tutorial by converting the BLAST output in out.txt into a spreadsheet format, using a Python script.  First, we need to get the script. We’ll do that using th...

    2325 days ago

  • Converting FASTQ to FASTA

    ...using paste cat INFILE.fastq | paste - - - - |cut -f 1, 2| sed 's/@/>/'g | tr -s "/t" "/n" > OUTFILE.fasta EMBOSS:seqret Standard script that can be used for many pur...

    2293 days ago

  • Installing Bio::SCF perl module

    ...read.o gzread.cgcc -O3 -fPIC -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DPIC -c -o objs/gzwrite.o gzwrite.cgcc -shared -Wl,-soname,libz.so.1,--version-script,zlib.map -O3 -fPIC -D_LARGEFI...

    2206 days ago

  • Steps to find all the repeats in the genome !

    ...ts in a genome from 2 to 9 length using a Perl script, you can use the RepeatMasker...he source provided. Use the provided Perl script: Once you have the "one_code_...e lengths of the reference elements. This script will generate several output...

    236 days ago