Results for "Sequencing"
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LRSDAY: Long-read Sequencing Data Analysis for Yeasts
Long-read sequencing technologies have become increasingly popular in genome projects due to their strengths in resolving complex genomic regions. As a leading model organism with small genome size and great biotechnological importance, the budding yeast, Saccharomyces cerevisiae, has many i...Tags: LRSDAY, Long-read, Sequencing, Data, Analysis, Yeasts
1695 days ago
vt: a variant tool set that discovers short variants from Next Generation Sequencing data.
vt is a variant tool set that discovers short variants from Next Generation Sequencing data. https://genome.sph.umich.edu/wiki/Vt https://github.com/atks/vtTags: vt, variant, tool, discovers, short, variants, Next, Generation, Sequencing, data
1541 days ago
Apollo: A Sequencing-Technology-Independent, Scalable, and Accurate Assembly Polishing Algorithm
Apollo is an assembly polishing algorithm that attempts to correct the errors in an assembly. It can take multiple set of reads in a single run and polish the assemblies of genomes of any size. Described by Firtina et al. (preliminary version at https://arxiv.org/pdf/1902.04341.pdf More at&...Tags: Apollo, Sequencing, Technology, Independent, Scalable, Accurate, Assembly, Polishing, Algorithm
1492 days ago
Genobuntu: Package for Next Generation Sequencing and Genome Assembly
Genobuntu is a software package containing more than 70 software and packages oriented towards NGS. In its current version, Genobuntu supports pre assembly tools, genome assemblers as well as post assembly tools.Commonly used biological software and example script files for different assembly p...Tags: Genobuntu, Package, Next, Generation, Sequencing, Genome, Assembly
1429 days ago
Choosing the Right NGS Sequencing Instrument for Your Study
The right sequencing instrument for your study depends on your project goal. Setting aside turnaround time and price, it essentially comes down to the numbers of reads and read length you need for your experiment. Below, we've described and compared metrics for each of the instruments available. ...Tags: Choose, NGS, Sequencing, Instrument, Study
672 days ago
FiNGS: Filters for Next Generation Sequencing
Key features Filters SNVs from any variant caller to remove false positives Calculates metrics based on BAM files and provides filtering not possible with other tools Fully user-configurable filtering (including which filters to use and their thresholds) Option to use filters identical to I...Tags: Filters, Next, Generation, Sequencing, FiNGS, NGS
1145 days ago
What Junk DNA? It’s an Operating System
The report adds to growing experimental support for the idea that all that extra stuff in the human genes, once referred to as “junk DNA,” is more than functionless, space-filling material that happens to make up nearly 98% of the genome. The paper adds to a growing body of knowledge ...Tags: Junk DNA, RNA, bioinformatics, sequencing, intron, granulocytes, splicing, gene expression
3893 days ago
Statistics of current Sequencing and Bioinformatics market
This survey conducted by Oxford Gene Technology, provider of innovative genetics research and biomarker solutions to advance molecular medicine, has released the results from a recent survey of researchers using next generation sequencing. (Source:http://ww...Tags: bioinformatics, sequencing, genomics, genetics, computational biology
3891 days ago
- Coupling established clinical–pathological indexes with state-of-the-art molecular profiling to create diagnostic, prognostic, and therapeutic strategies precisely tailored to each patient's requirements — hence the term “Precision medicine” Source:http://www.nejm.o...
Tags: PrecisionMedicine, sequencing, genetics, genomics, molecularbiology, nanochips, medicine, cancer
3888 days ago
Bioinformatics course and lectures
http://openwetware.org/wiki/User:Jarle_Pahr/BioinformaticsTags: bioinformatics, computational biology, sequencing, genomics, proteomics
3878 days ago
