Results for "Server"

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  • Ten recommendations for creating usable bioinformatics command line software

    Bioinformatics software varies greatly in quality. In terms of usability, the command line interface is the first experience a user will have of a tool. Unfortunately, this is often also the last time a tool will be used. Here I present ten recommendations for command line software author’s...

    Tags: Bioinformatics, Computational Biology, Rules, Server, Software, Tips, Suggestions

    1203 days ago

  • Vital-IT

    Vital-IT is a bioinformatics competence center that supports and collaborates with life scientists in Switzerland and beyond. The multi-disciplinary team provides expertise, training and maintains a high-performance computing (HPC) and storage infrastructure, so as to help develop, maintain and e...

    Tags: Bioinformatics, Computational biology, Genome, Server, Vital-IT, Switzerland

    1010 days ago

  • Google Genomics

    Explore genetic variation interactively. Compare entire cohorts in seconds with SQL-like queries. Compute transition/transversion ratios, genome-wide association, allelic frequency and more. Process big genomic data easily. Run batch analyses like principal component analysis and Hardy-W...

    Tags: Bioinformatics, Computational biology, Genome, Server, Google, Genomics, Cloud, USA

    1010 days ago

  • Bioinformatics Made Easy Search: Bioinformatics tools and run genomic analysis in the cloud

    InsideDNA makes hundreds of bioinformatics tools immediately available to run via an easy-to-use web interface and allows an accurate search across all functions, tools and pipelines. With InsideDNA, you can upload and store your own genomic/genetic datasets in a limitless cloud space, and insta...

    Tags: Bioinformatics, Computational Biology, Education, Solution, Puzzle, Study, Script, Cloud, Server, Work, InsideDNA

    765 days ago

  • SLURM

    SLURM workload manager software, a free open-source workload manager designed specifically to satisfy the demanding needs of high performance computing. This page is a HOWTO guide for setting up a SLURM installation, currently focused on a CentOS 7 Linux OS. Please send feedback to Ole.H.Nielsen...

    Tags: Bioinformatics, Server, Cluster, Batch, SLURM, Tutorial

    507 days ago

  • Enrichr: a comprehensive gene set enrichment analysis

    Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we present a significant update to one of the tools in this domain called Enrichr. Enrichr currently contains a large collection of diverse gene set libraries available for analysis and down...

    Tags: Bioinformatics, Analysis, Enrichment, Enrichr, Web, Server, GO, Pathway, Genes, BED, Ontologies, Drug, Cell, Disease

    149 days ago

  • dbCAN: a web server and DataBase for automated Carbohydrate-active enzyme ANnotation

    dbCAN is a web server and DataBase for automated Carbohydrate-active enzyme ANnotation, funded by the BioEnergy Science Center of the DOE. Similar resources on the web include CAZy database and CAT. All data in dbCAN are generated based on the family c...

    Tags: dbCAN, web, server, DataBase, automated, Carbohydrate, active, enzyme, ANnotation

    117 days ago

  • Companion: a web server for annotation and analysis of parasite genomes

    Currently available sequencing technologies enable quick and economical sequencing of many new eukaryotic parasite (apicomplexan or kinetoplastid) species or strains. Compared to SNP calling approaches, de novo assembly of these genomes enables researchers to additionally determine inse...

    Tags: Companion, web, server, annotation, analysis, parasite, genomes

    32 days ago