Nemo – A stochastic, individual-base, genetically explicit simulation platform
A recombination map has been added for all multi-locus traits. The map positions (chromosomal) for neutral markers (e.g. SNPs) and loci under selection...2735 days ago
SEX-DETector: A Probabilistic Approach to Study Sex Chromosomes in Non-Model Organisms
SEX-DETector is a probabilistic method that relies...data from a cross (parents and progeny of each sex) to infer autosomal and sex-linked genes (genes located o...perfomed, the individuals need to be genotyped; SEX-DETector takes files produced...2129 days ago
Indexcov: fast coverage quality control for whole-genome sequencing
...apidly identify samples with aberrant coverage profiles, reveal large-scale chromosomal anomalies, recognize potential batch effects, and infer the sex of a sample. Indexcov&nb...2039 days ago