3936 days ago
3936 days ago
Phylogenetic for Bioinformatics
Biologists estimate that there are about 5 to 100 million species of organisms living on Earth today. Evidence from...gorithmische_Bioinformatik_WS0405/phylogeny_script.pdf Phylogeny.fr is a free, sim...3936 days ago
3932 days ago
Most Commonly used Awk by Bioinformatician
Awk is a programming language that is specifically designed for qu...l its functionality with Perl, awk is simpler in many practical cases. Wh......' with a single call to awk. For a simple script, most of the timelag i...) print x,c[x]}' input.txt deal with sim...3902 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
Global overview papers Next generation quantitative genetics in plants. Jiménez-Gómez, Frontiers in P...(7):499-510, 2011 PubMed [A review of methods available at the time] A robust, sim...3769 days ago
List of In-silico Binding Site Prediction Tools
...y a 3D model and list of templates as inputs. A simple web interface is also provide...e pocket rather than reflecting merely how far away it is situated from the neare...ol for the identification of high clearance pathways or corridors which represent...3734 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
..., Small RNA-Seq, WGS/WES, Pathway enrichment, Fusion detection and...tandard file format used is a simple tab delimited file (.sft, .ts...ear regression framework, Pathway Association Analysis, Genome-...AN can be utilized in several ways including: (i) queries of th...2899 days ago
2904 days ago
Tools for Searching Repeats And Palindromic Sequences
...ter characterized and placed into five categories: Simple Repeats - Duplications of simple sets of DNA bases (typically...f specific base pairing in DNA (i.e., adenine (A) always bonds with (thymine (T) and cytosine (C) always bonds with guanine (G)) the...2201 days ago