Results for "Simulation"
Users
Skills: MD simulations3814 days ago
- Brief description: The next 10 years Molecular Dynamics Simulations Master through GROMACS (Groningen Machine for Chemical Simulations) SoftwareSkills: Molecular Dynamics Simulations
3059 days ago
Blogs
Computer simulation of genetic mechanism !!
...o guide the potential user of simulation models.It is not, in any way,...ART ART is a set of simulation tools to generate synthetic n...EvolSimulator A simulation test bed for hypotheses of ge...m Multilocus Coalescent Simulations http://code.google.com/p/mlc...2965 days ago
Structural variation: the hidden genomic treasure
...h SVs.2011 BreakSeqa pipeline for annotation, classification and analysis of SVs at single nucleotide resolution.2010 PEMera computational and simulation framework for discovering SVs...2693 days ago
- +1 more Blogs
Bookmarks
7th International Conference on Bioinformatics and Computational Biology (BICoB)
...d including: data mining, text mining, machine learning, modeling and simulation, pattern recognition, data vi...ion analysis: Linkage analysis, association analysis, population simulation, haplotyping, marker discover...3489 days ago
- ...omprehensive training in omics analysis, database design and management, software engineering and programming (including web-based development), simulation techniques and modeling, and...
1093 days ago
- +23 more Bookmarks
Pages
Bio++ : C Language libraries for your biological need
...s Parameter estimation under maximum likelihood.Ancestral states reconstructions: Marginal likelihood.(Weighted) substitution mapping.Sequences simulation under any substitution model,...3938 days ago
Keep Your Important SSH Session Running when You Disconnect from Server !!!
...a Bioinformatician/ Computational biologist we swim in the ocean of genomic/proteomics data, and play with them with an ease. In our day to day simulation, analysis, comparative study...3694 days ago
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Top-level pages
List of generic simulation software/tools/resource with brief description and homepage !!!
...u/cdpopCoalFace CoalFace is a simulation of the coalescent process wit...urceforge.net/EvolSimulator A simulation test bed for hypotheses of ge...imulator A rapid whole genome simulation program http://biostat.mc.van...is a program for Monte Carlo simulation of DNA polymorphism data for...3727 days ago
List of Biotechnology Research Laboratory, University, and Centre in India
...ennai C-MMACS - CSIR Centre for Mathematical Modelling and Computer Simulation, Bangalore CRRI - Central R...lligence and Robotics Centre for Mathematical Modeling and Computer Simulation (CSIR) Indian Academy of Sc...2561 days ago
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Wire posts
News
Biggest Human Brain Project (HBP) launched!!!
...project will use neuroinformatics and brain simulation to collect and integrate expe...er diagnosis, combined with disease and drug simulation, will accelerate the discover...supercomputing, driven by the needs of brain simulation, will impact a vast range of...3852 days ago
Opportunity posts
"Advances in Molecular Dynamics of Biomolecules" December 3-4, 2013 @ JNU
...es has led to a remarkable progress in the large scale simulations at the molecular level. Molecular Dynamics (MD) simulations have been an invaluable tool...of nanoseconds to microseconds and milliseconds! Since simulation algorithms combine domain kno...3867 days ago
- ...ped candidates Eligibility: Experience in computer-assisted scientific research in the area of Drug Design including Bio-molecular modeling and simulation studies, QSAR, Virtual screen...
3830 days ago
- +11 more Opportunity posts
ResearchLabs posts
- ...in-vitro assays, quantitative image analysis and cytosim, a computer simulation to study cellular architectur...d related proteins such as molecular motors. In the past, we combined simulations and experiments to study mic...
3939 days ago
- ...Area the discovery and on-demand use of biomedical data and services the formulation, discovery and evaluation of scientific hypotheses the simulation of biological systems at the...
3938 days ago
- +2 more ResearchLabs posts
Video
- ...s infrastructure for neuroscience data integration and manages scientific programs to develop standards for data sharing, analysis, modeling and simulation in order to catalyze insights...
3811 days ago
Bio-Scripts
Palindrome Simulation commands !
(base) ➜ palindromeAssemblySim more allCommands 3315 mutate.sh in= mutant15CH101.fasta out=mutant153CH101.fasta id=97 3316 mutate.sh in=mutant15CH101.fasta out=mu...1726 days ago
Create random 10000 SNPs in genome !
...ck specified options .. Running simuG for SNP/INDEL simulation >> Ignore all options for CNV/inversion/translocation simulation. This simulation use the r...0 > titv_ratio = 0.5 [Sun Jan 10 16:05:57 2021] Simulation completed! :) [Sun Jan 10...1201 days ago
- +6 more Bio-Scripts
Tags
- Reads simulator Wgsim is a small tool for simulating sequence reads from a reference genome. It is able to simulate diploid genomes with SNPs and insertion/deletion (INDEL) polymorphisms, and simulate reads with uniform substitution sequencing errors. It does not generate INDEL sequencing errors...
Tags: Bioinformatics, NGS, Reads, Silulator, INDEL, SNPs, Simulation
2863 days ago
Nemo – A stochastic, individual-base, genetically explicit simulation platform
A recombination map has been added for all multi-locus traits. The map positions (chromosomal) for neutral markers (e.g. SNPs) and loci under selection (QTLs, deleterious mutations, DMIs) can now be specified explicitly, or set at random. The map can hold an unlimited number of loci...Tags: Bioinformatics, Nemo, Simulation, Chromosome, Genome, NGS
2763 days ago
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Comments
Comment on "SVEngine: Allele Specific and Haplotype Aware Structural Variants Simulator"
Another nice simulation tool https://bioinformaticsonline.com/bookmarks/view/40302/simug-a-general-purpose-genome-simulator1391 days ago
Comment on "Computer simulation of genetic mechanism !!"
Thanks for the list. I came across GPOPSIM: a simulation tool for whole-genome genetic data ( http://bmcgenet.biomedcentral.com/articles/10.1186/s12863-015-0173-4 ), which see...2918 days ago
- +1 more Comments
