Results for "Simulation"

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  • Discover the genetic data simulator suitable for your study http://popmodels.cancercontrol.cancer.gov/gsr/ #Simulation #Discover

    Tags: Simulation, Discover

    1530 days ago

  • List of generic simulation software/tools/resource with brief description and homepage !!!

    List of generic simulation software/tools/resource with brief description and homepage ALF A Simulation Framework for Genome Evolution http://www.cbrg.ethz.ch/alfBayesian Serial SimCoal Bayesian Serial SimCoal, (BayeSSC) is a modification of SIMCOAL 1.0, a program written by Laurent Excoffier,...

    Tags: Bioinformatics, Tools, OS, Open Source, Simulation, Software, Tools, Resources

    1400 days ago

  • Alignathon: A collaborative competition to assess the state of the art in whole genome sequence alignment. http://compbio.soe.ucsc.edu/alignathon/index.html #Alignment #Simulation #Evolver

    Tags: Alignment, Simulation, Evolver

    1139 days ago

  • http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4144205/ Assessing when chromosomal rearrangements affect the dynamics of speciation: implications from computer simulations #Chromosome #Simulation #Evolut

    Tags: Chromosome, Simulation, Evolut

    1081 days ago

  • WgSim

    Reads simulator Wgsim is a small tool for simulating sequence reads from a reference genome. It is able to simulate diploid genomes with SNPs and insertion/deletion (INDEL) polymorphisms, and simulate reads with uniform substitution sequencing errors. It does not generate INDEL sequencing errors...

    Tags: Bioinformatics, NGS, Reads, Silulator, INDEL, SNPs, Simulation

    536 days ago

  • Nemo – A stochastic, individual-base, genetically explicit simulation platform

    A recombination map has been added for all multi-locus traits. The map positions (chromosomal) for neutral markers (e.g. SNPs) and loci under selection (QTLs, deleterious mutations, DMIs) can now be specified explicitly, or set at random. The map can hold an unlimited number of loci...

    Tags: Bioinformatics, Nemo, Simulation, Chromosome, Genome, NGS

    435 days ago

  • WGS Celera Assembler version 8.3rc2

    These are release notes for Celera Assembler version 8.3rc2, which was released on May 24, 2015.This distribution package provides a stable, tested, documented version of the software.  The distribution is usable on most Unix-like platforms, and some platforms have pre-compiled binary distri...

    Tags: Bioinformatics, wgs-assembler, WGS, PBcR, Pacbio, Correct, Packages, Tools, Simulation, Fastq

    245 days ago

  • simNGS and simLibrary – Software for Simulating Next-Gen Sequencing Data

    simNGS is software for simulating observations from Illumina sequencing machines using the statistical models behind the AYB base-calling software. By default, observations only incorporate noise due to sequencing and do not incorporate effects from more esoteric sources of noise that may be pres...

    Tags: simNGS, simLibrary, Software, Simulating, Next-Gen, Sequencing, Simulation

    13 days ago

  • Biggest Human Brain Project (HBP) launched!!!

    "In neuroscience, the project will use neuroinformatics and brain simulation to collect and integrate experimental data, identifying and filling gaps in our knowledge, and prioritising future experiments. In medicine, the HBP will use medical informatics to identify biological signatures of br...

    Tags: Brain, Neuroscience, HBP, Human, neuroinformatics, simulation, modelling, medical informatics, neurorobotics, microchips, neuromorphic computing, neural network, neurogenetics, optogenetics, brain mapping, sequencing

    1525 days ago

  • jobTree based python wrapper to run the genome simulation tool suite Evolver

    evolverSimControl (eSC) can be used to simulate multi-chromosome genome evolution on an arbitrary phylogeny (Newick format). In addition to simply running evolver, eSC also automatically creates statistical summaries of the simulation as it runs including text and image files. Also...

    Tags: jobTree, python, wrapper, genome, simulation, tool, suite, Evolver

    2 days ago