Results for "Simulator"
Blogs
Computer simulation of genetic mechanism !!
....dbs.umt.edu/cdpop Classical Genetics Simulator Web-based simulation so...lysis https://sourceforge.net/projects/episimsimulator/files/ EvolSimulator...Indelible A powerful and flexible simulator of biological evolution http:...2964 days ago
Bookmarks
- Reads simulator Wgsim is a small tool for simulating sequence reads from a reference genome. It is able to simulate diploid genomes with SNPs and insertion/deletion (INDEL...
2862 days ago
Grinder / Biogrinder - A versatile omics shotgun and amplicon sequencing read simulator
Grinder is a versatile program to create random shotgun and amplicon sequence libraries based on DNA, RNA or proteic reference sequences provided in a FASTA file. Grin...2527 days ago
- +9 more Bookmarks
Pages
Genome Assembly Tools and Software - PART2 !!
...bly Alignment of ContigsSimAssemblyStage1: Perfectly aligns TranscriptSimulator reads to their nucleotide tem...nimum-error-correction (MEC) model. PBSIM 1.0.3 – PacBio Reads SimulatorPacBio sequencers produced two...2674 days ago
Top-level pages
List of generic simulation software/tools/resource with brief description and homepage !!!
...ttp://egglib.sourceforge.net/EvolSimulator A simulation test bed for hyp...continuous-¬‐time coalescent simulator of genomic diversity under ar...urceforge.net/projects/gensim/GWAsimulator A rapid whole genome simulati...eforge.net/cmdlnmenus.html#rnaseqsimulatorRose Random model of sequence...3726 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...counts for confounding factors ex. relatedness Input: sample-to-sample genetic covariance matrix needs to be computed; multiple types of input; simulator requires input genotype and r...2897 days ago
Wire posts
Bio-Scripts
- $ sudo apt install art-nextgen-simulation-tools [sudo] password for neelam: Reading package lists... Done Building dependency tree Reading state information....
653 days ago
Tags
- ART is a set of simulation tools to generate synthetic next-generation sequencing reads. ART simulates sequencing reads by mimicking real sequencing process with empirical error models or quality profiles summarized from large recalibrated sequencing data. ART can also simulate reads using user o...
Tags: Bioinformatics, Stats, Reads, NGS, Simulator
2729 days ago
MetaSim A Sequencing Simulator for Genomics and Metagenomics.
Our software can be used to generate collections of synthetic reads that reflect the diverse taxonomical composition of typical metagenome data sets. Based on a database of given genomes, the program allows the user to design a metagenome by specifying the number of genomes pr...Tags: MetaSim, Sequencing, Simulator, Genomics, Metagenomics
2333 days ago
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Comments
- ...RT (short for Artificial Read Simulator) is a popular tool for genera...nother widely used short read simulator that generates synthetic read...based Illumina pair-end Reads Simulator) is a short read simulator th...amples of the many short read simulators available for bioinformatics...
404 days ago
Comment on "SVEngine: Allele Specific and Haplotype Aware Structural Variants Simulator"
Another nice simulation tool https://bioinformaticsonline.com/bookmarks/view/40302/simug-a-general-purpose-genome-simulator1390 days ago
