3910 days ago
3905 days ago
Most Commonly used Awk by Bioinformatician
...its functionality with Perl, awk is simpler in many practical cases. Why awk? You can replace a pipeline of 'stuff | grep | sed | cut...' with a single call to awk. For a simple scr...3875 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...fak.uni-bielefeld.de/rose/SelSim SelSim is a program for Monte Carlo simulation of DNA polymorphism data for a recom- bining region within which a single bi-allelic site has experienc...3700 days ago
List of In-silico Binding Site Prediction Tools
...sequence, chemical structure and 3D data in a single search. Currently it is the o...ne the characteristics of the binding sites of single proteins or classes of protei...es. In large-scale testing on a diverse set of single- and multi-chain protein stru...3707 days ago
Perl one-liner for bioinformatician !!!
...ful. Perl one-liners are small and awesome Perl programs that fit in a single line of code and they do one...' #If there are multiple spaces, delete all leaving one(make the file a single spaced file).perl -00 -pe '$_...3591 days ago
Commercial and public next-gen-seq (NGS) software
...S required. Novocraft - Tools for reference alignment of paired-end and single-end Illumina reads. Uses a Ne...a de novo sequence assembler that is designed for very short reads. The single-processor version is useful f...3482 days ago
Software packages for next gen sequence analysis
...required. * Novocraft - Tools for reference alignment of paired-end and single-end Illumina reads. Uses a Ne...a de novo sequence assembler that is designed for very short reads. The single-processor version is useful f...3206 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...de for the detection and the classification of single nucleotide polymorphisms in t...high-throughput NGS, not used for analysis of single samples; implemented in C and...and BCF Output: “The output format is a single row for each putative de novo...2872 days ago
2832 days ago