How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install sever...pers: moduleslibbio-samtools-perl - Perl interface to SamTools library for DNA sequencinglibbiojava-java - Java API to...3913 days ago
Tools to detect synteny blocks regions among multiple genomes
The synteny block (which etymologically means “on the same ribbon”) is a colle...uence blocks, regardless of whether it encompasses multiple genes, an area containing single gen...2573 days ago
The 5 reasons to mistakes at bioinformatics work !!!
When you're just starting out with biological programming, it's easy to run into complex pro...it out at end check out and clear your doubt even for a sing...d they are no more than 95 percent complete. Sometime a single pro...2069 days ago
Dynamic chromosome breakpoints !!!
Cell division involves the distribution of identical genetic mat...DNA, to two daughters’ cells. During this process, duplic...The vital metaphase stage of cell division, when the sister chr...DNA ends up in each daughter cell. However, before the mitotic...th eukaryotic and prokaryotic cells. But...3516 days ago
Computer simulation of genetic mechanism !!
...ate synthetic next-generation sequencing data by mimicking real sequencing process with empirical...del combined with a landscape cellular automaton. https://www.openabm....enome or whole-exome next-gen sequencing data, with an emphasis on use...2938 days ago
Tools and Method for Haplotype phasing !
Huge amounts of genotype data are being produced with recent technological advances...ide SNP microarrays and from ever more accessible whole-genome and whole-exome sequencing methods. The vast amount of k...1302 days ago
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Structural variation: the hidden genomic treasure
Genome re-sequencing projects have revealed substantial amounts of...detection in next generation sequencing data (paired end mapping, spl...cation and analysis of SVs at single nucleotide resolution.2010 PEMer...ing and visualization in deep sequencing data Link PEMer, st...2666 days ago
Important Journals, Blogs and Forums for Bioinformaticians
Journals. Most journals have RSS feeds for their curren...s of code: Lex Nederbragt’s blog on biology, sequencing, bioinformatics, … Si...sp;tidyverse, and more. nextgenseek.com: Next-Gen Sequencing Blog covering new development...2606 days ago
Software and Tools to detect structure variation with long reads !!
...y short-read data. With Single Molecule, Real-Time (SMRT) Sequ...caller using third generation sequencing Sniffles is a structural var...or data from a combination of sequencing platforms. There are two pie...ral Variation Tool. Why ask a single sv-detection approach to find eve...2571 days ago