Results for "Software"
Bookmarks
RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
...aeal genomes. It works by offering a standard software pipeline for identifying geno...notation pipelines. RASTtk offers a choice of software for identifying and annotatin...or batch submissions. This is the first major software restructuring of RAST since i...2919 days ago
- SLURM workload manager software, a free open-source workload manager designed specifically to satisfy the demanding needs of high performance computing. This page is a HOWTO guide...
2912 days ago
- ...s of gene content from near-universal single-copy orthologs selected from OrthoDB. BUSCO assessments are implemented in open-source software, with comprehensive lineage-s...
2906 days ago
- segemehl is a software to map short sequencer reads to reference genomes. Unlike...SA). More at http://www.bioinf.uni-leipzig.de/Software/segemehl/ Manual http://www.bioinf.uni-leipzig.de/Software/segemehl/segemehl_manual_0_1_...
2906 days ago
- gkno opens the world of complex bioinformatic analysis to people of all level of computational expertise. This site contains documentation, tutorials and information on all the tools that comprise gkno. http://gkno.me/how-to/install.html http://gkno.me/software.html
2895 days ago
- Cytoscape is an open source software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of Apps are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web.
2893 days ago
- ...ecting all newly acquired genes in a particular strain. Availability: The method is publicly available athttp://research.haifa.ac.il/~ssagi/software/nearHGT.zip
2863 days ago
- ...es, making sense of these datasets demands integrative and easy-to-use software tools. Moreover, network repr...ve data visualization, integration, and mining. Currently, there is no software that can take full advantage...
2858 days ago
Kraken: ultrafast metagenomic sequence classification using exact alignments
...e, 909 times faster than Megablast and 11 times faster than the abundance estimation program MetaPhlAn. Kraken is available at http://ccb.jhu.edu/software/kraken/. Krona https://sour...2858 days ago
Bioinformatics tools and software
USEARCH >Extreme high-throughput sequence analysis. Orders of magnitude faster than BLAST. MUSCLE >Multiple sequence alignment. Faster and more accurate than...2850 days ago
