Results for "Statistics"
Bio-Scripts
...ocol::https Archive::Extract Archive::Tar Archive::Zip CGI DBI Time::HiRes DBD::mysql Encode File::Copy::Recursive Perl::OSType Module::Metadata Statistics::Lite Tie::Autotie Tie::IxHas...2129 days ago
Calculate some statistics for a DNA alignment with Perl
use Bio::AlignIO; use Bio::Align::DNAStatistics; my $stats = Bio::Align::DNAStatistics->new(); my $alignin = Bio::AlignIO->new(-format => 'emboss', -file => 't/...2634 days ago
Plot the clock using Lastz -gerenal outfile
use strict; use warnings; use Statistics::R ; use List::Util qw(sum); #Usage perl clockPlot.pl Palindrome.palfc 1500 my $R = Statistics::R->new() ; $R->startR ;...2284 days ago
- ...Picard) Generate index statistics from a BAM file CalcMeta...Accumulate flag statistics given a BAM file FlagSta...arate results sections for SNPs and indels. Statistics are reported in three differe...
2060 days ago
Installing docker for Bioinformatics on Ubuntu !
...he Docker Hub for images start Start one or more stopped containers stats Display a live stream of container(s) resource usage statistics stop Stop one or mo...1498 days ago
Commands to install Statistics::R module in Ubuntu !
$ sudo apt-get install libstatistics-r-perl Reading package lists......ackages will be installed: libstatistics-r-perl r-base r-base-html 0.../ubuntu bionic/universe amd64 libstatistics-r-perl all 0.24-1 [23.3 kB]...previously unselected package libstatistics-r-perl. Preparing to unpack...1496 days ago
- ...ep 7/12 : RUN apt-get install -y bioperl && apt-get install -y libstatistics-distributions-perl && apt...e::Remove && cpanm install Spreadsheet::Read && cpanm install Statistics::ChiSquare ---> Using cache...
1494 days ago
- (JitMetaENV) ➜ ~ conda install -c bioconda quast Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version...
1200 days ago
picard tools command to get some insert statistics
#picard tools to get some insert statistics to see whether our reads seem to be in the correct place #module load picard/2.0.1 java -Xmx16g -XX:PermSize=8g -jar $PICARD_HOME/picard....1322 days ago
- (JitMetaENV) ➜ assembly conda install -c bioconda prokka Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen solv...
1200 days ago
