Results for "Strand NGS"
Top-level pages
The completion of the first human genome drafts was just a...igh-throughput next generation sequencing” (HT-NGS). The decreasing genome seque...genomic sequencing projects. In the fast growing HT-NGS technologies, the main challe...3936 days ago
Bioinformatics Companies in India
Following are the list of top 30 bioinformatics companies in India. The companies name o...Basavanagudi, Bangalore-56004.www.siritech.com 26. Strand Life Sciences Pvt. Ltd.#237,...Avenue, Raj Mahal Vilas, Bangalore 560 080 INDIAwww.str...3914 days ago
Perl one-liner for bioinformatician !!!
With the emergence of NGS technologies, and sequencing data most of the bi...code and they do one thing really well. These things include changing line spacing...ascii)'#converts ascii values into character strings.perl -le '@odd = grep {$_ % 2...3617 days ago
Next generation sequencing in R or bioconductor environment
...and bioconductor packages for NGS data analysis, some of them are as follows Biostrings The Biostrings package from...the biomaRt, IRanges, Biostrings, BSgenome, GO.db, multtest an...ocLite(c("ShortRead", "Biostrings", "IRanges", "BSgenome", "rtr...3613 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbenc....Partek - Commercial software for NGS, microarray, and qPCR data an...ibrary and a set of script targeted to NGS. There are modules to: clean...the University of California, BerkeleyNGS-Trex: Next Generation Sequenc...3507 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...riant calling and analysis of NGS data Supported workflows inc...ons: Supports all established NGS sequencing platforms- SOLiD,...ariants in pool or individual NGS data, reports overall p-value...daptive multiblups, LD weightings Input: PLINK format Output:...2897 days ago
Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scientists disco...cleic acid) or RNA (ribonucleic acid) strand that contains the same series...s regardless from which direction the strand is analyzed. Akin to a langua...es the sequences on the complimentary str...2200 days ago
- Bash Script source: https://gist.github.com/santhilalsubhash/367befcf5216be4b1fd9 Information: This script converts EnsEMBL GTF (Ex: https://gist.gith...
2095 days ago
- ...cluding quality of base calls, quality of mappings, and probabilities associated wi...ther the read aligns to the forward or reverse strand of the genome. A useful onlin...n of millions of beads with millions of single strand fragments produces a seque...
2858 days ago
Genome Assembly Tools and Software - PART1 !!
...iptome Assembly pipeline from stranded RNA-Seq reads Comprehens...r is also able to incorporate strand-specific RNA-Seq reads into t...novo assembly of large scale NGS data by conducting family-spe...arge and complex metagenomics NGS reads, such as soil. It makes...2674 days ago
