Results for "Structure"


  • ALIGNSEC: viewing protein secondary structure predictions within large multiple sequence alignments.

    ALIGNSEC is a module within ANTHEPROT designed for the interactive display, edition and printing of large scale multiple alignments integrating secondary structure predictions.

    32 days ago

  • PolyPhen-2: Prediction of functional effects of human nsSNPs

    PolyPhen-2 (Polymorphism Phenotyping v2) is a tool which predicts possible impact of an amino acid substitution on the structure and function of a human protein using straightforward physical and comparative considerations.

    490 days ago

  • ShRec3D

    ShRec3D is a program that aims at reconstructing a genome 3D structure (b) from the sole knowledge of the contacts between different genomic regions (a) as determined by Hi-C (http://w...

    1004 days ago

  • HivePlot

    ...r visualization of large networks — a method that is both general and tunable and useful as a starting point in visually exploring network structure. More at

    221 days ago

  • eQuant : energy-based quality assessment of protein

    Protein structures are of varying quality. Especially, in-silico modeled structures are prone to contain serious...ness and reliability of these particular protein structures.eQuant is a service for stru...

    92 days ago

  • A Brief Bioinformatics Tutorial of your choice to find homologues, how to perform a multiple alignment of the homologues you've selected and how to edit this alignment. The Structure part is about molecular visua...

    1223 days ago

  • Entrez Direct: E-utilities on the UNIX Command Line

    ...the NCBI's suite of interconnected databases (publication, sequence, structure, gene, variation, expression,...of data from document summaries or other results that are returned in structured XML format. This can elimina...

    341 days ago

  • Genome STRiP

    Genome STRiP (Genome STRucture In Populations) is a suite of tools for discovering and genotyping structural variations using sequencing data. The methods are designed to detect...

    384 days ago

  • Painless package development for R

    Devtools makes package development a breeze: it works with R’s existing conventions for code structure, adding efficient tools to support the cycle of package development. With d...

    510 days ago


    ...all the information in raw reads.Fermi follows the overlap-layout-consensus paradigm and uses the FM-DNA-index (FMD-index) as the key data structure. It is inspired by the string...

    381 days ago