Results for "Structure"

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  • https://www.predictprotein.org/ #Protein #Structure #Prediction

    Tags: Protein, Structure, Prediction

    936 days ago

  • Protein structure and domain help needed !

    what does it mean in protein structure as one domain, two domain, three domain and so on ? can anybody help me to know about this ? if there is any link or related article plz do a share. PS: in relation protein structure

    Tags: Protein, Domain, Structure, Help, Definition, Link, Material, Tutorial

    460 days ago

  • BreakSeq2

    Ultrafast and accurate nucleotide-resolution analysis of structural variants More at http://bioinform.github.io/breakseq2/ Download BreakSeq2 Latest version: https://github.com/bioinform/breakseq2/archive/2.2.tar.gzFor other versions, see "releases". https://github.com/bioinform/breakseq2/rele...

    Tags: Bioinformatics, Computational Biology, Variation, Structure, BreakSeq2

    456 days ago

  • Hagfish - assess an assembly through creative use of coverage plots

    Hagfish is a tool that is to be used in data analysis of Next Generation Sequencing (NGS) experiments. Hagfish builds on the concept of coverage plots and aims to assist (amongst others) in quality control of de novo genome assembly or identification of structural variation in a genome ...

    Tags: Bioinformatics, Hagfish, Assess, Assembly, Coverage, Plots, NGS, Structure, Variation, SV, Assembly, Genome

    375 days ago

  • LUMPY

    A probabilistic framework for structural variant discovery. Ryan M Layer, Colby Chiang, Aaron R Quinlan, and Ira M Hall. 2014. "LUMPY: a Probabilistic Framework for Structural Variant Discovery." Genome Biology 15 (6): R84. doi:10.1186/gb-2014-15-6-r84. More at https://github.com/arq5...

    Tags: Bioinformatics, Analysis, NGS, Lumpy, SV, Variation, Structure, Genome

    278 days ago

  • Structural variants PPT

    1000 Genomes data tutorial at ASHG Structural variants presentation by Jan Korbel European Molecular Biology Laboratory (EMBL) Heidelberg Genome Biology Research Unit Reference:  https://www.genome.gov/pages/research/der/1000genomesprojecttutorials/structuralvariants-jankorbel.pdf

    Tags: Bioinformatics, Analysis, NGS, Structure, Variations, Genome

    265 days ago

  • Which are the best known web server for protein structure prediction?

    Anyone PhD here ?  I need help in protein structure prediction.

    Tags: Bioinformatics, Protein, Server, Prediction, Structure

    261 days ago

  • Interesting plotting https://genomebiology.biomedcentral.com/articles/10.1186/s13059-015-0678-1 #Plot #Structure #Variation #Cotton

    Tags: Plot, Structure, Variation, Cotton

    162 days ago

  • SeqMule: Automated human exome/genome variants detection

    SeqMule takes single-end or paird-end FASTQ or BAM files, generates a script consisting of more than 10 popular alignment, analysis tools and runs the script line by line. Users can change the pipeline or fine-tune the parameters by modifying its configuration file. SeqMule also has some built-in...

    Tags: Bioinformatics, Analysis, Assembly, Genome, SeqMule, Exome, Structure, Variation

    84 days ago

  • Software and Tools to detect structure variation with long reads !!

    Uncovering the connection between genetics and heritable diseases requires an approach that looks at all the variant bases and types in a genome. While a PacBio de novo assembly resolves the most novel SV variants. 8-10X PacBio coverage of single genomes or trios reveals triple the SVs ...

    Tags: Bioinformatics, LR, Long, Reads, Tools, Software, Pacbio, Genome, DNA, Sequence, NGS, SV, Variation, Structure

    76 days ago