Results for "Structure Variation"

Bio-Scripts

  • Read a tab delimited file and search with perl

    use strict; use warnings; use Data::Dumper; use Text::CSV; use IO::Handle; my $file = "/home/urbe/Tools/Alienomics_v0.1/Alienomics/output/intermediate_files/rRNA/refGene.megablast"; open my $fh, "[0]\n"; warn Dumper $row; # To see the structure }

    2509 days ago

  • Plot the clock using Lastz -gerenal outfile

    use strict; use warnings; use Statistics::R ; use List::Util qw(sum); #Usage perl clockPlot.pl Palindrome.palfc 1500 my $R = Statistics::R->new() ; $R->startR ;...

    2282 days ago

  • Downloading GATK !

    jitendra@jitendra-UNLOCK-INSTALL[SNP] wget https://github.c...Tool) (Internal) Extracts evidence of structural variations from reads FindBreakpoi...hat may harbor structural variants StructuralVariationDiscoveryPipelineSpark (BET...

    2059 days ago

  • Installing nupack3.0.6

    #http://www.nupack.org/downloads/source ➜ tools git:(master) ✗ cd nupack3....c pfuncUtils.c: In function ‘PrintStructure’: pfuncUtils.c:950:7: warnin...Wunused-result] scanf("%s", structure); ^~~~~~~~~~~~~~~~~~~...design_engine.c: In function ‘parseStructure...

    2010 days ago

  • Pack a perl program with their dependencies on Ubuntu !

    ..... Jit@jit.aber SvABA: Structural variation and indel detection by local...Jit 6 days ago SvABAStructuralvariationindeldetectionlocalassembly...GeneCo-transferBacteriaAssociationsPopulationStructure github.com - GeneMate...

    1495 days ago