Results for "Suite"
Blogs
List of gene ontology software and tools
...o is a leading provider of data mining & analysis solutions in systems biology. MetaCore, GeneGo's flapship product, is an integrated software suite for functional analysis of ex...3700 days ago
- ...f breakpoints. We introduce weights to the graph edges to model the reliability of each adjacency. ANGES:reconstructing ANcestral GEnomeS maps A suite of Python programs that allow...
2521 days ago
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Bookmarks
Taverna Workflow Management System
...an open source domain independent Workflow Management System – a suite of tools used to design and e...d is funded through a range of organisations and projects. The Taverna suite is written in Java and includ...3906 days ago
Collection of molecular modelling and drug design related tutorial ...
The Rosetta macromolecular modeling, prediction, and design software suite is supported by a large developer community and enjoys a diverse user base. Each year Rosetta developers an...3810 days ago
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Pages
Bio++ : C Language libraries for your biological need
...wnload/index.html Reference: http://162.38.181.25/BioPP/index.htmlDutheil J, Boussau B. Non-homogeneous models of sequence evolution in the Bio++ suite of libraries and programs. BM...3938 days ago
Genome Assembly Tools and Software - PART2 !!
...memory-intensive, only a few assemblers, best suited for your assembly. For the s...s SAMMate is an open source GUI software suite to process RNA-Seq data. It i...led. Atlas 2005 – Whole Genome Assembly SuiteAtlas is a collection of...2676 days ago
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Top-level pages
Useful Publications and Websites for Deep Sequencing Data Analysis
...-60, 2009. PubMedCentral Improving SNP discovery by base alignment quality. Li H, Bioinformatics 27(8):1157-8, 2011. PubMed BEDTools: a flexible suite of utilities for comparing ge...3770 days ago
List of bioinformatics open source projects/software.
...flows AutoDock http://autodock.scripps.edu/ suite of automated docking tools B...nment EMBOSS http://emboss.sourceforge.net/ Suite of packages for sequencing, s...Tools Data format (SAM) and accompanying tool suite, for storing large nucleotide...3747 days ago
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Wire posts
News
SCFBio have developed Sanjeevini
...tion in File menu. We hope this feature will help collaborating groups stay in touch with each other.The module contains all modules of Sanjeevini suite of software for structure bas...2351 days ago
Opportunity posts
- ...Galaxy, BaseSpace, Trinity Statistics: Microsoft Excel and R. Database: MySQL Genome Browser: UCSC, Ensemble, IGV, IGB Motif Analysis Tools: MEME Suite, Transfac and RSAT Functional...
3156 days ago
ResearchLabs posts
The Institute for Molecular Bioscience (IMB), Bailey Lab
Pattern recognition and computational biology MEME Suite software development; gene expression; mathematical modelling; gene regulation and transcription Specialization: Pattern recognition and modelling in computational biology Link @ http://www.imb.uq.edu.au/tim-bailey3938 days ago
Bio-Scripts
Install Parrot Virtual Machine !
...later retrieval......done. Okay, we're done! You can now use `make' to build your Parrot. After that, you can use `make test' to run the test suite. Happy Hacking, T...1527 days ago
Downloading mmseqs databases !
...ASTA - PDB Aminoacid - https://www.rcsb.org - PDB70 Profile - https://github.com/soedinglab/hh-suite - Pfam-A.full Profi...932 days ago
Tags
- Motif based sequence analysis suits The MEME Suite allows the biologist to discover novel motifs in collections of unaligned nucleotide or protein sequences, and to perform a wide variety of other motif-based analyses. The MEME Suite supports motif-based analysis of DNA, RNA and protein s...
Tags: Bioinformatics, Analysis, Motif, Tools, Suite
2680 days ago
GRIDSS: the Genomic Rearrangement IDentification Software Suite
GRIDSS is a module software suite containing tools useful for the detection of genomic rearrangements. GRIDSS includes a genome-wide break-end assembler, as well as a structural variation caller for Illumina sequencing data. GRIDSS calls variants based on alignment-guided positional de Bruijn gra...Tags: GRIDSS, Genomic, Rearrangement, IDentification, Software, Suite
1439 days ago
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Comments
Comment on "Tools for Differential expression analysis"
...ession values of the genes and provides a user-friendly interface for performing the analysis. Cuffdiff: This tool is a part of the Cufflinks suite and is used for differential...411 days ago
Comment on "List of non-commercial NGS genotype-calling software"
...and indel caller for mapped sequencing data. [ paper-2015 ]gridss – GRIDSS: the Genomic Rearrangement IDentification Software Suite. [ paper-2017 ]smoo...1133 days ago
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