How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several pe...wrappers: moduleslibbio-samtools-perl - Perl interface to SamTools library for DNA sequencinglibbiojava-java - J...3912 days ago
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analys...he great biological programmer also read about the BioPerl packages, genomics, DNA string, genomic theories, or...3912 days ago
Well designed regular expression cheat sheet
In our computational biology work, we mostly play with DNA or AA string. For string based programming work this regular expression cheat sheet is really helpful. Keep it handy.3912 days ago
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Does anyone have Nanopore latest updates?
There was a lot of buzz about Oxford Nanopore Technologies® is developing the G.... The platform technology uses nanopores to analyse single molecules including DNA/RNA and proteins. With a broa...3775 days ago
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Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a programmer down - it allows fo...s:Sequence analysis Sequence and Site objects, with various Alphabet support (DNA, RNA, Proteins, Codons, any '...3910 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinformatics tools.BioRuby project provides an integrated...3909 days ago
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Postdoctoral position in bioinformatics @ Sweden
Information about the department The Department of Mathemati...ods development for and analysis of next generation DNA sequencing, in particular com...arge-scale data, in particular from next generation DNA sequencing, is highly valued....3910 days ago
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Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to decode all human DNA sequences, has highlighted a...fe. One is example is the genome. In all organisms, DNA contains genetic information,...3879 days ago
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available...= x['accession'] print("downloading", nm) dna = Entrez.efetch(db='nucleotid...').read().split("\n")[1:] allseq[nm] = ''.join(dna) import json with open("d...1098 days ago
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Programming language to build synthetic DNA
A team led by Georg Seelig (http://homes.cs.washington.edu/~seelig/index.html) at University of Washington has developed a programming language for chemistry that it hopes will streamline efforts to design a network that can guide the behavior of chemical-reaction mixtures in the same w...Tags: Synthetic DNA, Programming, Georg Seelig, Washington University, Nanotechnology, Computational Biology
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