Results for "Synthetic DNA"
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Well designed regular expression cheat sheet
In our computational biology work, we mostly play with DNA or AA string. For string based programming work this regular expression cheat sheet is really helpful. Keep it handy.3938 days ago
- Bioinformatics is developing very rapidly. With new tools and software it is, now a days...following fundamental topics in bioinformatics: assembling genomes, comparing DNA and protein sequences, predic...
3933 days ago
Nucl2Vec: Local alignment of DNA sequences using Distributed Vector Representation
We demonstrate a novel approach forlocal alignment of DNA reads with respect to reference genome.For this process we have used Skip-gram model for creatingencoding(Nucl2Vec) and k-nearest neigh...1134 days ago
What Junk DNA? It’s an Operating System
The report adds to growing experimental support for the idea that all that extra stuff in the human genes, once referred to as “junk DNA,” is more than function...3900 days ago
Next Generation Sequencing (NGS) Tutorials
Institute of computational biomedicine, Cornell...e.co.uk/blog/2009/04/basics-sequencing-dna-part-1/ http://www.genetic-i...e.co.uk/blog/2009/08/basics-sequencing-dna-part-2/ A window into third-...y and genotyping using next-generation DNA sequencing data PubMed:...3476 days ago
Bioinformatics software for biologists in the genomics era
The genome sequencing revolution is approaching a landmark figure of 1000 completely seq...enomes. Coupled with fast-declining, per-base sequencing costs, this influx of DNA sequence data has encouraged...3775 days ago
Encode sequencing data freely available to download and use for academic means
In Encode, regulatory elements investigated via DNA hypersensitivity assays, assays of DNA methylation, and chromatin immunoprecipitation (ChIP) of proteins that interact with DNA, including modified histones...3694 days ago
- ...e expression (DGE) analysis using a very small synthetic dataset from a well studied o...ll variants (SNVs and indels) in human genomic DNA using a small set of reads fr...o analyze the interaction between proteins and DNA. Amplicons Protocol Am...
3641 days ago
Managing and Analyzing Next-Generation Sequence Data
Centralized Bioinformatics Core Facilities provide shared resources for the computationa...faced with an unprecedented flood of data generated by the next generation of DNA sequencers, these groups foun...3627 days ago
Swabs to Genomes: A Comprehensive Workflow
The sequencing, assembly, and basic analysis of microbial genomes, once a painstaking an...omputational tools. However, there are a wide variety of options available for DNA library preparation and seque...3545 days ago
