Tags: Bioinformatics, Analysis, NGS, Repeats, TE, RepeatModeler, RECON, de-novo, family, Genome
2779 days ago
Computational resources for TE discovery and TE detection
Transposable Elements (TEs) to genome structure and evolution as well as their impact on genome sequencing, assembly, annotation and alignment has generated increasing interest in developing new methods for their computational analysis. Following are the list of resource and location for TE dis...Tags: Computational, resources, TE, discovery, detection, Transposable, Elements (TEs)
2236 days ago
The Extensive de novo TE Annotator (EDTA)
The EDTA package was designed to filter out false discoveries in raw TE candidates and generate a high-quality non-redundant TE library for whole-genome TE annotations. Selection of initial search programs were based on benckmarkings on the annotation performance using a manually curated TE libra...Tags: Extensive, de novo, TE, Annotator, EDTA
1695 days ago