Results for "Tool"

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  • Scalpel

    A team from Cold Spring Harbor Laboratory has released an algorithm, called Scalpel, for finding insertions and deletions in next generation sequencing data sets. Scalpel, which is open source and available for download on SourceForge, outperformed the popular tools GATK HaplotypeCaller and ...

    Tags: Bioinformatics, Scalpel, Genetic, Variants, Discovery, Tool

    1127 days ago

  • dcGOR

    An R package for analysing ontologies and protein domain annotations has been published in PLoS Computational Biology (http://dx.doi.org/10.1371/journal.pcbi.1003929). The package is distributed as part of CRAN (http://cran.r-project.org/package=dcGOR), and also at GitHub for version control.The ...

    Tags: Bioinformatics, Computational Biology, R, dcGOR, Tool, Protein, Package

    1047 days ago

  • Release Notes for Genome Workbench 2.10.5

    New Features in latest release New ProSplign tool integrated with Genome Workbench (Tutorial, Video) New export function for BAM/cSRA coverage graphs (Tutorial) New export function for alignments GFF3 format ((Tutorial)) Tree View: implemented new export mode based on selections (tutor...

    Tags: Bioinformatics, NCBI, Features, ProSplign, Tool, Genome Workbench

    496 days ago

  • ORFfinder with smart BLAST

    ORF Finder ORFfinder is a graphical analysis tool for finding open reading frames (ORFs). We’ve been working on a few updates, and we’d like to find out what you think about them. Read on to find out what you can do with the new ORFfinder. Smart BLAST (https://ncbiinsights.ncbi...

    Tags: Bioinformatics, NCBI, Features, Tool, SmartBLAST, ORFfinder

    491 days ago