Results for "Tools"

Tags

  • Useful Babraham Bioinformatics Projects http://www.bioinformatics.babraham.ac.uk/projects/download.html #Bioinformatics #Projects #Tools

    Tags: Bioinformatics, Projects, Tools

    2869 days ago

  • Alignment software http://molbiol-tools.ca/Alignments.htm #Tools #Software #Alignment

    Tags: Tools, Software, Alignment

    2869 days ago

  • Tools for Searching Repeats And Palindromic Sequences

    What are genomic interspersed repeats? In the mid 1960's scientists discovered that many genomes contain stretches of highly repetitive DNA sequences ( see Reassociation Kinetics Experiments, and C-Value Paradox ). These sequences were later characterized and placed into five categories: Simple...

    Tags: Bioinformatics, Search, Repeats, Palindromic, Sequences, Tools, Software

    2173 days ago

  • Stand-alone programs for Bioinformatician

    This directory contains applications for stand-alone use, built specifically for a Linux 64-bit machine. For help on the bigBed and bigWig applications see:http://genome.ucsc.edu/goldenPath/help/bigBed.htmlhttp://genome.ucsc.edu/goldenPath/help/bigWig.html View the file 'FOOTER' to see the usag...

    Tags: Bioinformatics, Stand-alone, Tools, Scripts, Use

    2868 days ago

  • In which journals should I publish my bioinformatics software/tools?

    Until there is a radical change in the way that academic credit is given, the principal record of scientific research is still the peer-reviewed publication. Given that software is a fundamental part of doing science in the digital age, the question we are often asked is: where can I publish...

    Tags: Bioinformatics, Tools, Publish, Journals

    2864 days ago

  • Tools and Method for Haplotype phasing !

    Huge amounts of genotype data are being produced with recent technological advances, both from increasingly  comprehensive and inexpensive genome-wide SNP microarrays and from ever more accessible whole-genome and whole-exome sequencing methods. The vast amount of knowledge contained in thes...

    Tags: Tools, Method, Haplotype, phasing

    1301 days ago

  • DarkHorse

    DarkHorse is a bioinformatic method for rapid, automated identification and ranking of phylogenetically atypical proteins on a genome-wide basis. It works by selecting potential ortholog matches from a reference database of amino acid sequences, then using these matches to calculate a lineag...

    Tags: Bioinformatics, HGT, Genes, Horizontal, Transfer, Method, Tools, DarkHorse

    2836 days ago

  • CSBB-v1.0

    CSBB is a command line based bioinformatics suite to analyze biological data acquired through varied avenues of biological experiments. CSBB is implemented in Perl, while it also leverages the use of R and python in background for specific modules. Major focus of CSBB is to allow users from biolo...

    Tags: Bioinformatics, CSBB-v1.0, Tools, Modules, Packages, Analyse, Perl, R

    2829 days ago

  • Bioinformatics tools and software

    USEARCH >Extreme high-throughput sequence analysis. Orders of magnitude faster than BLAST. MUSCLE >Multiple sequence alignment. Faster and more accurate than CLUSTALW.  UPARSE >OTU clustering for 16S and other marker genes. Highly accurate OTU sequences and improved diversity ...

    Tags: Bioinformatics, Analysis, Visualization, NGS, Tools, Software

    2823 days ago

  • How to validate the assembly?

    I am working on assembly of new genome. I am just wondering how to validate my assembled genome? 

    Tags: Bioinformatics, NGS, Assembly, Validate, Approach, Tools

    2759 days ago