Results for "Transcriptome analysis"
Blogs
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analyse...bbit hole and possibly never getting a solution. Learn to perform root cause analysis, learn enough about the under...3940 days ago
Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on computational analysis of huge amounts of data and t...UI software for computational analysis? Should I use commercial bioi...to accomplice your biological analysis work. This means that if you...3697 days ago
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Bookmarks
- I bet, this website will be your best friend in near future. This helps us to explore the...from it. You can find some useful open source bioinformatics codes for your analysis work. You can use the left ba...
3906 days ago
Rdatamining.com : R and Data Mining
This website presents examples, documents and resources on data mining with R. Documents o...or Data Mining, R and Data Mining: Examples and Case Studies and Time Series Analysis and Mining with R.3905 days ago
- +230 more Bookmarks
Files
- Bioinformatician life is interconnected, they always dream for a powerful server, little more space on server as they are generating lots of data per run, dream to publish results in good impact journals, meetings reminders :) and research analysis off course!!!
3900 days ago
- Some fish kidnaped a bioinformatician for their genome analysis.
3843 days ago
- +6 more Files
Discussion topics
- Like in case of plant genomes where nature of genome is too complex and huge in size to accomplish complete de novo assembly by current sequencing technology. What would be alternate solution? Can we live in reference free world?
3934 days ago
Does anyone have Nanopore latest updates?
There was a lot of buzz about Oxford Nanopore Technologies® is developing the Gri...sed MinION™ device. These are a new generation of electronic molecular analysis system for use in scientific...3803 days ago
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Pages
Bio++ : C Language libraries for your biological need
C has always been a language that never attempts...Bioinformatics, including sequence analysis,phylogenetics, molecular evol...e libraries are as follows:Sequence analysis Sequence and Site objects, w...a set of C++ libraries for sequence analysis, phylogenetics, molecular evo...3937 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing,...3937 days ago
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Top-level pages
- The completion of the first human genome drafts was just a start of the modern DNA sequenc...the fast growing HT-NGS technologies, the main challenge is to cope with the analysis of vast production of sequenc...
3938 days ago
- "Bioinformatics is a science of biological predictions and analysis" -- Jitendra Narayan "T...to provide raw data for later analysis. Once the raw data are availa...of protein domains. Combined analysis of structural and genomic dat...
3937 days ago
- +44 more Top-level pages
Wire posts
News
- PhylomeDB is a public database for complete collections of...y and paralogy predictions which are based on the analysis of the phylogenetic trees. Th...ims at providing a high-quality phylogenetic analysis of different genomes , i...
3909 days ago
- In current era, we are handling huge amount of genomics data, and analysing it to make som...ological sense out of it. Large-scale sequence studies requiring BLAST-based analysis produce huge amounts of data...
3879 days ago
- +35 more News
Opportunity posts
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Climate)...to analyze Next Generation Sequencing (NGS) data analysis. In the context of a flagship...omputational facilities and expertise in NGS data analysis, and will benefit as well fro...3938 days ago
- van Noort Group is looking for PhD fellows We currently access an unprecedented knowled...a prerequisite for this position. Experience with high throughput sequencing analysis methods, machine learning, pr...
3938 days ago
- +197 more Opportunity posts
ResearchLabs posts
- Location :European Molecular Biology Laboratory (EMBL), Heidelberg, Germany. Our long-t...with an emphasis on mitosis. We develop in-vitro assays, quantitative image analysis and cytosim, a computer simul...
3938 days ago
- Melanie Bahlo is an applied statistician working in the areas of statistical genetics, bio...edigrees Investigation of DNA sharing in distantly related individuals CNV analysis in pedigrees and connections...
3938 days ago
- +46 more ResearchLabs posts
Video
Computational Biology in the 21st Century: Making Sense out of Massive Data
Computational Biology in the 21st Century: Making Sense out of Massive Data Air d...will soon outstrip advances in computing power to perform current methods of analysis. Extracting new science from...3892 days ago
Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to d...tion strain Bacillus subtilis. Until now, genome analysis could only be done in nationa...-generation sequencer development has made genome analysis possible in an ordinary lab....3907 days ago
- +8 more Video
Bio-Scripts
Blast result parser with Perl and Bioperl
#!/usr/local/bin/perl # # Dr. Xiaodong Bai # It may be freely distributed under GNU G...ted and ready for import into a spreadsheet program for browsing and further analysis. # use strict; use warni...2904 days ago
Perl script to run SATSUMA in loop !
#!/usr/bin/perl -w use strict; use File::Temp qw(tempfile); # Usage perl 1by1.pl for SATSUMA analysis # User need to set the ref...2130 days ago
- +8 more Bio-Scripts
Polls
Which of the following programming language is best for a bioinformatics beginner?
I will be doing NGS in the course of my research work and I will like to learn a programmi...asically want to do de-novo assembly, map reads, align reads, and expression analysis. Recommendations welcomed. Wh...3520 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3516 days ago
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Tryst
Tryst with a Bioinformatician # Dr Altan Kara
...DE:5153403)) is, applying a bioinformatics-supported genome, transcriptome, proteome, and metabolome analysis to reveal the molecular profi...ckage is, it provides lots of useful tools for comprehensive analysis and comparison of high-throug...2352 days ago
Groups
R is a free software programming language and a software enviro...ners for developing statistical software and data analysis. R's popularity has increased...cal packages. Bioconductor provides tools for the analysis and comprehension of high-thr...3941 days ago
Next Generation Sequencing (NGS)
This group meant to discuss different sequencing methods and their data analysis. Now, sequencing is almost one of the most popular technique scientific fraternity pursue worldwide to comprehand the genomi...3897 days ago
- +4 more Groups
Tags
- -Nature Publishing Group selected single-cell sequencing as Method of the Year for 2013. ->100 peer-reviewed single-cell publications based on Fluidigm technology Source: http://online.wsj.com/article/PR-CO-20131231-904382.html About Single-Cell Sequencing: http://bernstein.harvard.ed...
Tags: Single-Cell Sequencing, DNA sequencing, single-cell mRNA sequencing, transcriptome analysis
3766 days ago
- Free Live Webinar on Leukocyte immunobiology helps us predict post-operative risk using pre-operative markers on 9 Aug, 8 am PST Speaker: Mario Deng MD FACC FESCProfessor of MedicineAdvanced Heart Failure/MechanicalSupport/Heart TransplantDavid Geffen School of Medicine at UCLARonald ...
Tags: Webinar, Transcriptome analysis, flow cytometry, Strand NGS, Prof Mario Deng, UCLA, Strand Life Sciences
2473 days ago
Comments
Comment on "Running Trinity on RNA-seq !"
...data explorations. Perform differential expression analysis. Trinity provides direct support for several DE analysis methods, including edgeR, DES...ism has an assembled genome, consider using the Trinity transcriptome assemblies for gene stru...2113 days ago
