Results for "Tumor"
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...ect numerical copy number aberrations (CNAs) of chromosomal segments in tumor genomes. However, there is la...n-randomly affected by chromosomal breakpoints across (large) series of tumor samples. ‘GeneBreak’ is devel...2144 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
...detection of somatic variants at low concentrations. In RNA-Seq, large-scale and UMI support can be used in single-cell-based studies that reveal tumor-cell heterogeneity, even at l...2377 days ago
- TelomereHunter is a tool for estimating telomere content from human whole-genome sequencing data. It is designed to take BAM files from a tumor and a matching control sample as input...
2275 days ago
- ...from mapped paired-end sequencing reads. It is optimized for analysis of germline variation in small sets of individuals and somatic variation in tumor/normal sample pairs. Manta di...
2159 days ago
PureCN: copy number calling and SNV classification using targeted short read sequencing
This package estimates tumor purity, copy number, and loss of heterozygosity (LOH), and classifies sin...somatic variant detection and copy number pipelines, and has support for tumor samples without matching norm...2087 days ago
Severus: a somatic structural variation (SV) caller for long reads
Severus is a somatic structural variation (SV) caller for long reads (both PacBio and ONT). It is designed for matching tumor/normal analysis, supports multiple tumor samples, and produces accurate and c...26 days ago
