Results for "UCSC"

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  • Installing a minimal UCSC genome browser mirror in Ubuntu 10.04 64 bits http://goo.gl/PWHxDd #UCSC #Genome

    Tags: UCSC, Genome

    3861 days ago

  • Encode sequencing data freely available to download and use for academic means

    In Encode, regulatory elements investigated via DNA hypersensitivity assays, assays of DNA methylation, and chromatin immunoprecipitation (ChIP) of proteins that interact with DNA, including modified histones and transcription factors, followed by sequencing (ChIP-Seq). More information: h...

    Tags: Encode, UCSC, genome browser, Sequencing, RNA-Seq, Chip-Seq, Epigenomics, Methylation, histone modification, regulatory elements, HMM

    3689 days ago

  • Download the human genome hg19 wget --timestamping 'ftp://hgdownload.cse.ucsc.edu/goldenPath/hg19/chromosomes/chr*.fa.gz' #Human #Genome #Download #UCSC

    Tags: Human, Genome, Download, UCSC

    3685 days ago

  • UCSC Genome Browser and Blat software !

    This directory contains Genome Browser and Blat application binaries built for standalone command-line use on various supported Linux and UNIX platforms. To determine which set of binaries to download, type "uname -a" on the command line to display your machine type. In most cases the usage state...

    Tags: Bioinformatics, UCSC, Genome, Browser, Blat, Software

    2983 days ago

  • File formats http://genome.ucsc.edu/FAQ/FAQformat.html#format1 #UCSC #Format

    Tags: UCSC, Format

    2983 days ago

  • UCSC SARS-CoV-2 Genome Browser

    The UCSC SARS-CoV-2 Genome Browser (https://genome.ucsc.edu/covid19.html) is an adaptation of our popular genome-browser visualization tool for this virus, containing many annotation tracks and new features, including conservation with similar viruses, immune epitopes, RT–PCR and sequencing...

    Tags: UCSC, SARS-CoV-2, Genome, Browser, COVID19

    834 days ago

  • Biological databases !

    Now a days there are a lots of genomics databases available around the world. This bookmark is created to provide all links in one place ... ftp://ftp.ncbi.nih.gov/genomes/ https://hgdownload.soe.ucsc.edu/downloads.html

    Tags: download, database, ncbi, ftp, genome, dna, reads, genome, assembly, files, ucsc

    1528 days ago