Results for "Variants"
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Comment on "Coronavirus Resources !"
...Variant Classification scheme that defines three classes of SARS-CoV-2 variants: Variant of Interest Vari...rsting piece of information https://www.cdc.gov/coronavirus/2019-ncov/variants/variant-info.html951 days ago
Comment on "Calling variants in non-diploid systems"
FreeBayes is widely used for calling variants in diploid systems. However, it can also be used for calling variants in pooled samples where the n...1034 days ago
Comment on "Genome in a Bottle (GIAB) Consortium"
...rently, benchmark VCF and BED files for small variants are available for GRCh37 and...giab/release/ Draft benchmarks for difficult variants and regions:Structural varian...elcome. Publications by GIAB:Benchmark small variants for 7 GIAB genomesOlder bench...1550 days ago
Comment on "Nanopolis: polish a genome assembly"
...ds.tmp - samtools index reads.sorted.bam python nanopolish_makerange.py draft.fa | parallel --results nanopolish.results -P 8 \ nanopolish variants --consensus -o polished.{1}.v...2089 days ago
Comment on "Structural variation: the hidden genomic treasure"
...;GRIDSS: the genomic rearrangement identification software suite. A high-speed next-gen sequencing structural variation caller. GRIDSS calls variants based on alignment-guided pos...2693 days ago
Comment on "Does anyone have Nanopore latest updates?"
Long read nanopore sequencing for detection of HLA and CYP2D6 variants and haplotypes http://f1000research.com/articles/4-17/v13379 days ago
