Results for "Visualizing"
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NanoPack: visualizing and processing long-read sequencing data
The NanoPack tools are written in Python3 and released under the GNU GPL3.0 License. The source code can be found at https://github.com/wdecoster/nanopack, together with links to separate scripts and their documentation. The scripts are compatible with Linux, Mac OS and the MS Windows 10 subsyste...Tags: NanoPack, visualizing, processing, long-read, sequencing, data, ngs
1942 days ago
OMTools: a software package for visualizing and processing optical mapping data
OMTools, an efficient and intuitive data processing and visualization suite to handle and explore large-scale optical mapping profiles. OMTools includes modules for visualization (OMView), data processing and simulation. These modules together form an accessible and convenient pipeline for optica...Tags: OMTools, software, package, visualizing, processing, optical, mapping, data
1849 days ago
heatmaply: popular graphical method for visualizing high-dimensional data
This work is based on ggplot2 and plotly.js engine. It produces similar heatmaps as d3heatmap, with the advantage of speed (plotly.js is able to handle larger size matrix), and the ability to zoom from the dendrogram. heatmaply also provides an interface based around the plotly R package. T...Tags: heatmaply, popular, graphical, method, visualizing, high-dimensional, data
1561 days ago
- WEGO (Web Gene Ontology Annotation Plot) is a simple but useful tool for visualizing, comparing and plotting GO (Gene Ontology) annotation results. As the GO vocabulary became more and more popular, WEGO was widely adopted and used in many researches. Therefore we have updated WEGO 2.0 in 2018. H...
Tags: WEGO, Web, Gene, Ontology, Annotation, Plot, tool, visualizing, plotting, GO, Gene, Ontology, annotation, results
1469 days ago
OrthoVenn3: an integrated platform for exploring and visualizing orthologous data across genomes
OrthoVenn3 is a powerful tool for comparative genomics analysis, used as a web server for full genome comparisons, annotation, and evolutionary analysis of orthologous clusters across multiple species. It has already been used by thousands of users from over 60 countries.Tags: OrthoVenn3, integrated, platform, exploring, visualizing, orthologous, data, across, genomes
354 days ago
Ribbon: Visualizing complex genome alignments and structural variation:
Ribbon can be used for long reads, short reads, paired-end reads, and assembly/genome alignments. Instructions for each data format are available by clicking on "instructions" in each tab on the right. Local installation: You can install Ribbon locally from Github by following the instructions ...Tags: Ribbon, Visualizing, complex, genome, alignments, structural variation
2334 days ago
EyeChrom: Visualizing Chromosome Count Data From Plants
It's goal is to show chromosmal data per genus. Select the genus, and the plot will show the records found for it in the Chromosome Counts Database. note: Report an issue via Gihub: github.com/roszenil/CCDBcurator and github.com/RodrigoRivero/EyeChrom https://bsapubs.onlinelibrary.wiley.com/doi/...Tags: EyeChrom, Visualizing, Chromosome, Count, Data, From, Plants
1929 days ago
