BOL: Results for "WGS"

Results for "WGS"

- Archana Malhotra@archana
Software and Tools to detect structure variation with long reads !!
...V calls using tiled local assemblies across the entire genome instead of "signature" regions Genotyping of SVs with Illumina paired-end reads from WGS samples More at https...
2596 days ago
- biogeek@biogeek
Bioinformatics tools developed for Oxford Nanopore data analysis !
...ads LQSDALIGNER, Celera OLC Nanocorrect, Nanopolish correctorhttps://github.com/jts/nanopolish PBcRHGAP or BLASR, Celera OLC PBcR correctorhttp://wgs-assembler.sourceforge.net/wik...
2309 days ago

- Rahul Nayak@rahul
Bioinformatics Protocols
...ine; and often allow more control over branching and iteration logic. WGS/exome GATK-based variant call...esigned for human (or similar) data. The master branch is configured for WGS data; there is an exome branc...
3642 days ago
- Rahul Nayak@rahul
BioScripts
...easy and flexible manner to perform both simple and complex bioinformatics tasks. The next-generation sequencing included whole genome sequencing(WGS), transcriptome sequencing (w...
3223 days ago
+12 more Bookmarks

- Jit@jit.aber
Genome Assembly Tools and Software - PART2 !!
...erred haplotypes. RePS 2.0 – WGS Sequence AssemblerRePS (...t-masked Phrap with scaffolding), a WGS sequence assembler, that expl...ting assemblies. Fermi 1.1 – WGS de novo Assembler based on th...t Substitution Sequencing Errors in WGS Data Sets Quake is a pa...
2674 days ago

- Jitendra Prajapati@jprajapati81
List of Bioinformatics Software Tools for Next Generation Sequencing
...customizable aligners (Bowtie, Bowtie 2, BWA, GSNAP, Isaac 2, SHRiMP 2, STAR, TMAP, TopHat and TopHat 2) Applications for RNA-Seq, Small RNA-Seq, WGS/WES, Pathway enrichment, Fusi...
2897 days ago
- Jit@jit.aber
Genome Assembly Tools and Software - PART1 !!
...ssembler 8.3 – Whole Genome Shotgun Assembler Celera Assembler (wgs-assembler) is scientific soft...Phusion 2.1c – Assembly Genome Sequences from Whole Genome Shotgun(WGS) Reads Phusion is a softwa...
2674 days ago
+3 more Top-level pages

- Rahul Agarwal@raag
WGS/WES Mapping to Variant Calls - Version 1.0! http://www.htslib.org/workflow/ #Omics #NGS #WGS #SNP
3534 days ago
- Jit@jit.aber
Whole-Genome Sequencing (WGS) PPT http://www.bx.psu.edu/~ratan/Sequence%20Analysis.pdf #PPT #WGS #Ratan
2610 days ago

- Yeshodari@Yeshodari
Webinar on 'An integrated RNA and DNA approach to unravel genetic regulation in cancer'
...stract Whole exome DNA sequencing (WES) or whole genome DNA sequencing (WGS) allows detection of mutation...erse transcriptional aberrations that can be missed in a stand-alone WES/WGS analysis. An integration of D...
3360 days ago
- Neelam Jha@neelam
GenBank release 257.0 is now available!
...llion records. The current release has: 246,119,175 traditional records containing 2,112,058,517,945 base pairs of sequence data 2,631,493,489 WGS records containing 22,294,446...
245 days ago

- Pragati Singh@pragati
Senior Research Fellow at NIT, Rourkela
...rable Qualifications/ Experiences: Experience of Programming in PERL,R, Python, Unix and Visual Studio + Knowledge in NGS data analysis work flows ,WGS and statistical packages such...
3556 days ago
- RESHMA BHAGAT@Reshma
Sr.Bioinformatics Analyst (NGS) at Ocimum Biosolution
...t have minimum 2+ years of hands on experience in NSG data analysis such as RNA-Seq,Exome-Seq ,Chip-Seq and downstream analysis. 7. Knowledge in WGS ,WES, Targeted re-sequencing,...
3448 days ago
+3 more Opportunity posts

- Jit@jit.aber
Downloading GATK !
...Collects quality yield metrics from SAM/BAM/CRAM file(s). CollectRawWgsMetrics (Picard)...te (spanning all samples) metrics from the provided VCF file CollectWgsMetrics (Picard)...
2064 days ago
- Jit@jit.aber
Pack a perl program with their dependencies on Ubuntu !
...tes is an R package implementing a network approach to identify horizontal gene co-transfer (HGcoT) between bacteria using whole-genome sequencing (WGS) data. It is particularly use...
1500 days ago

- Rahul Nayak@rahul
Comment on "Genome in a Bottle (GIAB) Consortium"
...-to-map regions like pseudogenes and segmental duplications). GIAB is also exploring expanding to additional samples consented for release of WGS and redistribution of commerc...
1549 days ago
- Rahul Nayak@rahul
Comment on "Want to Know which genome assembler rule the world ?"
Canu Assembler is my personal favourate.Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II/Sequelor Oxford Nanopore MinION).
1939 days ago