Results for "Whole genome re-sequencing"
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several perl modules and dependencies. Installing Perl modules manually by resolving all the...3940 days ago
Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on computational analysis of huge amounts of data and try to ma...ype of analysis that you are doing. This is particularly true in the case of genome assemb...3698 days ago
- +42 more Blogs
Bookmarks
List of popular bioinformatics software/tools
In current genome era, our day to day work is to handle the huge geneome sequences, expression data, several other datasets. This link provide a comprehensive list of commonly used sofware/tools.3936 days ago
- Bioinformatics is developing very rapidly. With new tools and software it is, now a da...fundamental topics in bioinformatics: assembling genomes, comparing DNA and protein s...ssion, constructing evolutionary trees, analyzing genome rearra...
3935 days ago
- +645 more Bookmarks
Files
- Some fish kidnaped a bioinformatician for their genome analysis.
3844 days ago
- Alien spy are looking for human genome sequences ..
3830 days ago
- +5 more Files
Discussion topics
Which are the best statistical programming languages to study for a bioinformatician?
In Bio-informatics based genome sequencing and predicting metabolic pathways research jobs I used Matlab, SAS, SPSS, R and several Bioconductor packages. Ma...3942 days ago
- Like in case of plant genomes where nature of genome is too complex and huge in size to accomplish complete de novo assembly by current sequencing technology. What would be alternate solution? Can we live in reference free world?
3935 days ago
- +2 more Discussion topics
Pages
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, dat...r the Ruby language. This project is supported by University of Tokyo (Human Genome Center...3938 days ago
- I found several useful bioinformatics articles which exaplain, defi...iculum. By Russ Altman. Human Genome Research A description of the Human Genome Project. Retooling for Bioin...arch. Understanding the human genome By D. L. Brutlag, in&nbs...2001 Bioinformatics U., Genome Techno...
3911 days ago
- +7 more Pages
Top-level pages
- The completion of the first human genome drafts was just a start of the modern DNA sequenc...ration sequencing” (HT-NGS). The decreasing genome sequencing cost and desire to...ogically suitable language to handle ever growing genome or pro...
3938 days ago
- ...nsive electronic databases on genomes and protein sequences, and t...s on three types of datasets: genome sequences, macromolecular str...s DataBase for the C. elegans genome, FLYBASE for D. melanogaster...notation in the comparison of whole genomes. Several methods detec...
3938 days ago
- +54 more Top-level pages
Wire posts
News
- "Ludovic Orlando and Eske Willerslev , Centre for GeoGenetics have beaten sequencing of....htm http://geogenetics.ku.dk/latest-news/a-700.000-year-old-horse-gets-its-genome-sequen...
3802 days ago
UK Genome Science Meeting, sept 2nd-4th, 2013
Following the success of the last three years' UK Next Gen Sequencing meetings at Nottingham, the newly named UK Genome Scienc...3909 days ago
- +75 more News
Opportunity posts
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Climate), a network of 13 labor...riants, of the comparison of multiple and diverse genomes of a same species and of the construction of pan- and core-genomes. Thes...3939 days ago
- van Noort Group is looking for PhD fellows We currently access an unprecedented knowledge on the basic compone...lenge in the project will be to identify which of the many variants in these genomes have...
3939 days ago
- +158 more Opportunity posts
ResearchLabs posts
- The human genome project and similar projects in disease-causing organisms such as Plasmodium falciparum, which c...uence data in cancer Methods for analysis of structural variation in cancer genomes Next...
3938 days ago
- Statistical functional genomics in experimental medicine The genome projects and the accelerated development of high-throughput genomic technologies such as microarrays have revolutionis...
3938 days ago
- +60 more ResearchLabs posts
Fun
Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, names will be like this...BLAST : Eak khoj Munna Bhai Promoter Gene se Genome tak. Maine BLAST kiya. NCBI...matician No.1 Mera Naam Tool Developer Hum Apke Genome Mein R...3909 days ago
What a bioinformatician always dream for ???
Well established bioinformatics labs with SGI(silicon graphics interface) License of all commercial softwares. Complete, and fully assembled genome of the...3835 days ago
- +3 more Fun
Video
Computational Biology in the 21st Century: Making Sense out of Massive Data
Computational Biology in the 21st Century: Making Sense out of Massive Data Air date: Wednesday, February 01, 2012, 3:00:00 PM Category: Wednesday Afternoon Lec...3892 days ago
Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to decode all...e life. One is example is the genome. In all organisms, DNA contai...ation, and this is called the genome. But the amount of informatio...erved between species. If the genome is considered as a long text,...3907 days ago
- +28 more Video
Bio-Scripts
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # https://www.gisaid.org/ has more (1200?), but they require you to sign up import re...1126 days ago
Download genome using NCBI esearch command line !
#Download using command line "NC_005956.1" / "CP003784.1" esearch -db nucleotide -query "NC_005956.1" | efetch -format fasta > seq1.fa esearch -db nucleotide -query "...1092 days ago
- +67 more Bio-Scripts
Polls
Which of the followings are the best place to study Bioinformatics ?
Bioinformatics is a major growth area and qualified Bioinformaticians are in high demand. An explosion in biological data has resulted from genome projec...3407 days ago
Will MinION Nanopore sequencing increase the number of Next Generation Sequencing projects?
Will MinION Nanopore sequencing increase the number of Next Generation Sequencing projects?3188 days ago
Tryst
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineering and Biotechnology Institu...for (AKMARK (Project CODE:5153403)) is, applying a bioinformatics-supported genome, trans...2352 days ago
Groups
INTIMATE secrets hidden in your DNA could be stolen without you even realisin...ng a glass from which you have drunk, a "genome hacker" could obtain a comprehensive scan of your genome, revealing DNA variants that...or bioinformatician you hack the entire genome to und...3943 days ago
Python is a programming language that lets you work more quickly and integrate your systems more effectively. Python is an easy to learn, powerful programming language. It...3936 days ago
- +6 more Groups
Tags
Bioinformatics approach to Boar Taint
Meat products obtained from intact male pigs often produce offensive smell or odour which is recognized as a complex genetic trait called boar taint.Androstenone and Skatole in the fat primarily cause boar taint. Metabolism of androstenone and sex steroids share a common pathway which makes ...Tags: Sequencing, DNA, Whole genome re-sequencing, Boar taint, androstenone, skatole, pig, QTL, SNP, haplotype, fine mapping, SSC
3780 days ago
Comments
Comment on "Short-read assembly using Spades !"
Short-read assembly is the process of constructing a genome sequence from a large number of...g reads. SPAdes (St. Petersburg genome assembler) is a popular softw...e directory where the assembled genome will be saved, "forward_reads...s and accuracy of the assembled genome by com...406 days ago
- There are several tools available for short read simulators that...ator that generates synthetic reads based on the whole genome sequencing technology. It can...simulator that can generate synthetic reads from whole genome sequen...
406 days ago
- +98 more Comments
