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  • Largest Genome Sequenced

    The enormous size of the loblolly pine genome having 22 billion base pairs compared to only 3 billion in the human genome. In other words, it is seven times larger than a human&...

    3681 days ago

  • Carrot2 clustering engine

    ...iption, very fast. Available as part of the open source Carrot2 framework k-means: base line clustering algorithm, produces bag-of-words style cluster descriptions. A...

    377 days ago

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  • Compressive Genomics

    ...well be that the number of complete genome sequences being stored is increasing rapidly, but the actual amount of new data is very small. In other words, a single DNA sequence isn't...

    3903 days ago

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  • Print all possible 2 combination of words ( ATGC): $letter = join',','A','T','G','C'; @abc=glob "{$letter}{$letter}"; foreach (@abc) { print "$_\n"; } #Perl #PerlTrick #TipsOftheDay

    3206 days ago

  • Extract values : cat seeALN.xls | grep -w "scaffold_1" to #grep #exact #matching words from file seeALN.xls

    2622 days ago

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  • Edit DNA !!!

    ...ago, may provide scientists with unprecedented power to rewrite the code of life. This means a genome can be edited, much as a writer might change words or fix spelling errors. It al...

    3698 days ago

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  • IBSE Post-doctoral Fellowships

    ...known, level of proficiency and certification if any (attach a single PDF or link to Dropbox/Google Drive/OneDrive) A research proposal (500-750 words) listing preferred research a...

    1266 days ago

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  • Clump Finding Problem Solved with Perl

    The question at http://rosalind.info/problems/1d/ Script are moved to http://bioinformaticsonline.com/snippets/view/34633/clump-finding-problem-solved-with-perl

    Tags: Bioinformatics, Computational Biology, Education, Solution, Puzzle, Study, Script, Perl, Frequest, Words, Clump, Rosalind

    2317 days ago

  • Pattern Matching Problem Solution with Perl

    Problem at http://rosalind.info/problems/1c/ #Find all occurrences of a pattern in a string.#Given: Strings Pattern and Genome.#Return: All starting positions in Genome where Pattern appears as a substring. Use 0-based indexing.use strict;use warnings;my $string="GATATATGCATATACTT";my $subStr="A...

    Tags: Bioinformatics, Computational Biology, Education, Solution, Puzzle, Study, Script, Perl, Frequest, Words, Rosalind

    3236 days ago

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