Results for "alignment"
Blogs
Computer simulation of genetic mechanism !!
...aysicsabc/ BEERS BEERS was designed to benchmark RNA-Seq alignment algorithms and also algorithm...ages/rmetasim/index.html RNA Seq Simulator RSS takes SAM alignment files from RNA-Seq data and s...2964 days ago
Various scholarships around the world !!
...bsp;Fellowship program provides relevant and contemporary nephrology training to physicians.Award Details: The total sum of the grant is in alignment with the length of the traini...2806 days ago
Live Webinar on RNA-Seq Data Analysis on 9 Nov 2016
...ract: Strand NGS supports an extensive workflow for the analysis and visualization of RNA-Seq data. The workflow includes Transcriptome / Genome alignment, Differential expression anal...2745 days ago
Structural variation: the hidden genomic treasure
...ols CNVnatora tool for CNV discovery and genotyping from depth of read mapping.2011a,2011b AGEa tools that implements an algorithm for optimal alignment of sequences with SVs.2011 B...2692 days ago
- ...cestral genome reconstruction procedure. Ancestors implements several alignment algorithms, an indel maximum...sequence homologs in other species. The input is a multiple sequence alignment and a phylogenetic tree that...
2520 days ago
Bioinformatics tools developed for Oxford Nanopore data analysis !
...ools developed for Oxford Nanopore data BWA Fast nanopore data tuned alignment tool https://github.com/lh3/b...ror-prone readshttps://github.com/isovic/graphmap LASTNanopore tuned alignment toolhttp://last.cbrc.jp/ LIN...2310 days ago
BBTools for bioinformatician !
...utput, only sam outputNote about alignment stats: For paired reads, you...nsidering the cigar strings from alignment, "Match Rate" is the number o...ple genomes. In any case, if the alignment score is higher to one genome...tter) are shared between the two alignment files and how many mapped rea...2260 days ago
List of motif discovery tools !
...tures. DBAli -- A Database of Structure Alignments Mine the protein structure...in protein sequences. MALISAM -- Manual ALIgnments for Structurally Analogous M...ting Functional Residues in Protein Sequence Alignments Predict functional sites in...1983 days ago
Understanding reads mapping and flags !
...nbsp;(i.e. one portion of the alignment on forward strand and another...on reverse strand). Chimeric Alignment: An alignment of a read...nguished by the supplementary alignment flag. Chimeric reads are ind...entative alighment, for other alignment positions, we called them sup...1826 days ago
Bioinformatics tools for telomere to telomere assembly !
... JumboDB – tool for de Bruijn graph construction (Anton Bankevich @AntonBankevich)● uLTRA – tool for splice alignment of long transcriptomic reads...981 days ago
