Results for "annotation"
Top-level pages
...r example, SWISSPROT [1] contains verified protein sequences and more annotations describing the function of a...major problem are errors in databanks and databases (mostly errors in annotation), in particular since errors...3931 days ago
- ...nomics Resource to Study Gene and Genome Evolution in Plants: VISTA: Software for Genomics Artemis Artemis is a free genome viewer and annotation tool that allows visualizatio...
3926 days ago
- Genome Browser is the platform/database used for searching and retreiving sequences and annotation of genomes belong to various eukaryotes, prokaryotes, etc. Following are the weblink...
3898 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...Genome assembly has a major impact on gene content: a comparison of annotation in two Bos taurus assemblies...conductor, held in Seattle in Dec 2010 Genomic Regions Enrichment of Annotations Tool - A web service to test...3763 days ago
List of In-silico Binding Site Prediction Tools
...ligand-binding sites is often the starting point for protein function annotation and structure-based drug desi...s from amino acid sequences is important for the automated functional annotation of novel proteins. In the pre...3728 days ago
Next generation sequencing in R or bioconductor environment
...ers (sequence space), strand information and annotation data. Documentation...acklayer provides an interface for exporting annotation feature data to various genom...no The ChIPpeakAnno package provides. batch annotation of the peaks identified from...3608 days ago
Commercial and public next-gen-seq (NGS) software
...ts own alignment format.SSAHA has been optimized for short-reads, too. But yes, SSAHASNP appears in your "SNP/INDEL discovery" category. Genome Annotation/Genome Browser/Alignment View...3503 days ago
Apps for Busy Bioinformatics Researchers !!!
...d, Genomic Variations and many other databases to retrieve up-to-date annotation information for over 30 speci...ed, Genomic Variations andmany other databases to retrieve up-to-date annotation information for over 30specie...3525 days ago
Software packages for next gen sequence analysis
...encing machines. It was designed to assign more accurate base quality estimates to the 454 pyrosequences. Developers at Boston College. Genome Annotation/Genome Browser/Alignment View...3226 days ago
Comprehensive list of visualization tools for biological pathways
...p://www.biocyc.org/ Pathway Explorer Interactive Java drawing tool for the construction of biological pathway diagrams in a visual way and the annotation of the components and interac...2271 days ago
