Results for "bacterial"

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  • The #bacterial #DnaA-trio #replication origin element specifies single-stranded DNA initiator #binding http://www.nature.com/nature/journal/vaop/ncurrent/full/nature17962.html

    Tags: bacterial, DnaA, replication, binding

    588 days ago

  • Beginner’s #guide to #comparative #bacterial genome #analysis using #next-generation sequence data https://microbialinformaticsj.biomedcentral.com/articles/10.1186/2042-5783-3-2

    Tags: guide, comparative, bacterial, analysis, next

    202 days ago

  • Unicycler: Hybrid assembly pipeline for bacterial genomes

    Unicycler is an assembly pipeline for bacterial genomes. It can assemble Illumina-only read sets where it functions as a SPAdes-optimiser. It can also assembly long-read-only sets (PacBio or Nanopore) where it runs a miniasm+Racon pipeline. For the best possible asse...

    Tags: Unicycler, Hybrid, assembly, pipeline, bacterial, genomes

    69 days ago

  • Tools for bacterial whole genome annotation

    RAST – Web tool (upload contigs), uses the subsystems in the SEED database and provides detailed annotation and pathway analysis. Takes several hours per genome but I think this is the best way to get a high quality annotation (if you have only a few genomes to annotate). Pr...

    Tags: Tools, bacterial, whole, genome, annotation, prokaryotic, genes

    32 days ago

  • SIMBA: a web tool for managing bacterial genome assembly generated by Ion PGM sequencing technology

    SIMBA, SImple Manager for Bacterial Assemblies, is a Web interface for managing assembly projects of bacterial genomes. SIMBA was created to assist bioinformaticians to assemble bacterial genomes sequenced with NextGeneration Sequencing (NGS) platforms quickly, easily and effectively. SIMBA also ...

    Tags: SIMBA, Web, Tool, Bacterial, Genome, Assembly, Ion PGM, Sequencing

    240 days ago