Results for "blast"
Top-level pages
...e searches have become readily available through the introduction of PsiBLAST [3]; studying evolutionary a...en TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI–BLAST: a new ge...3931 days ago
Useful Links for Bioinformaticians
...verview of Sequence Comparison Algorithms in Molecular Bill Pearson talks about Protein Evolution Biological Sequences and Information BLAST HELP MANUAL BLAST tutorial Pedestrian guide to...3114 days ago
Best book Titles for Learning Bionformatics
...tioned some bioinformatics and its related books in subgroups. Hope you will like the list. Sequence Analysis and General Bioinformatics BLAST, Ian Korf, Mark Yandell, Jose...3902 days ago
Apps for Busy Bioinformatics Researchers !!!
...When used in combination with other zip apps, and also web-tools like Blast, this app allows you to analy...When used in combination with other zip apps, and also web-tools like Blast, this app allows you to analy...3525 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ain Workbench offers database search (Genbank, Blast, Pubmed); 2000 organizations...n of amino acid residues- collected though PSI-BLAST; can be applied to nonsynonym...rovides structural effects of a mutation; Uses BLAST against UniProt and PDB along...2893 days ago
Converting BLAST output into CSV
...nted to do something with all this BLAST output. Generally, that&rsquo...ve all matches, or do a reciprocal BLAST, or something. As with most...de this tutorial by converting the BLAST output in out.txt into a spre...rsquo;re looking to run the script blast/blast-to-csv.py using Python:...2321 days ago
Tools for bacterial whole genome annotation
...lable under GNU General Public License version 3.0 and is accessible at: http://www.cbrc.kaust.edu.sa/BEACON/. BlastKOLA: Assigns K numbers to the user's sequence data by BLAST searches, respectively, again...2316 days ago
Computational resources for TE discovery and TE detection
...for TE discovery and TE detection: BLASTER suite http://urgi.versailles.inra.fr/development/blaster/ Censor http://...ga.edu/mak06.html MaskerAid http://blast.wustl.edu/maskeraid/ mer-en....biochem.vt.edu/dl_software.htm WU-BLAST http://blast.wustl.edu2258 days ago
Some useful Bioinformatics links
...eviews Cancer https://www.nature.com/articles/nrc2591 bioinformatics - BLAST DNA Sequences Reversed - Biology Stack Exchange https://biology.stackexchange.com/questions/8160/blast-dna-sequences-reversed LASTZ...2226 days ago
Understanding BLASTn output format 6 !
BLASTn output format 6 BLASTn maps DNA against DNA, for example...sequences against a reference genomeblastn -query genes.ffn -subject genome.fna -outfmt 6 BLASTn tabular output format 6 Col...amesframe Subject framebtop Blast traceback operations (BTOP)st...2123 days ago
