Bioinformatics Algorithm Demonstrations and Tutorials
...ric approximate matching), Hierarchical Clustering (used in phylogenetic studies and microarray analysis of gene expression), a Naive Bayes Classifier for simulated microarray gene...3667 days ago
2727 days ago
RITA: Rapid identification of high-confidence taxonomic assignments for metagenomic data
...BLAST or UBLAST with compositional classifications from a Naive Bayes classifier, RITA is able to achieve very...ied, RITA uses a pipeline to first identify cases where both types of classifier are in agreement, which const...2314 days ago
Deepbinner: a signal-level demultiplexer for Oxford Nanopore reads
...s a tool for demultiplexing barcoded Oxford Nanopore sequencing reads. It does this with a deep convolutional neural network classifier, using many of the archi...1949 days ago
Deepbinner: a signal-level demultiplexer for Oxford Nanopore reads
Deepbinner is a tool for demultiplexing barcoded Oxford Nanopore sequencing reads. It does this with a deep convolutional neural network classifier, using many of the architectural adva...1509 days ago
Metabuli 분리 improves metagenomic read classification
...nsitive and specific, recovering 99% and 98% of DNA or AA classifiers. Metabuli is metagenomic classifier that jointly analyze both DNA...iting point mutations to distinguish close taxa. AA-based classifiers have higher sensitivity in d...300 days ago