Results for "comparisons"
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ACT is a Java application for displaying pairwise comparisons between two or more DNA sequences. It can be used to identify and analyse regions of similarity and difference between geno...2782 days ago
BLAST Ring Image Generator (BRIG)
...ss-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of gen...nd other sequences as concentric rings. BRIG will perform all BLAST comparisons and file parsing automaticall...2759 days ago
FSA: Fast Statistical Alignment
...pairwise estimations of homology. This is made possible by the sequence annealing technique for constructing a multiple alignment from pairwise comparisons, developed by Ariel Schwartz...2630 days ago
- ...ss-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of gen...nd other sequences as concentric rings. BRIG will perform all BLAST comparisons and file parsing automaticall...
2620 days ago
- ...environment of Sockeye. By using the Java3D API to visualize genomic data in a 3D environment, we are able to compactly display cross-sequence comparisons. This provides the user with...
2619 days ago
AVID: A Global Alignment Program
...and methods for their comparison. These formats and methods should be useful for future studies. The tools we have developed for the alignment comparisons, as well as the AVID program,...2523 days ago
PLAST: A fast, accurate and NGS scalable bank-to-bank sequence similarity search tool
...performance sequence comparison tool designed to compare two sets of sequences (query vs. reference), Reduces the processing time of sequences comparisons while providing highest quali...2332 days ago
AliTV—interactive visualization of whole genome comparisons
AliTV, which provides interactive visualization of whole genome alignments. AliTV reads multiple whole genome alignments or automatically generates alignments from the pr...2292 days ago
Reference-free prediction of rearrangement breakpoint reads
lideSort-BPR ( b reak p oint r eads) is based on a fast algorithm for all-against-all comparisons of short reads and theoretical analyses of the number of...2235 days ago
CBS Comparative Microbial Genomics group - BioTools download page
...Negativicutes, represented by 31 genomes including 10 genera. The analyses include 16S rRNA phylogeny, basic DNA and codon statistics, proteome comparisons using BLAST and graphical ana...2067 days ago
