Results for "concordant reads"

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  • Bioinformatics approach to Boar Taint

    Meat products obtained from intact male pigs often produce offensive smell or odour whic...int levels were done in Illumina HiSeq2000 to >10X average coverage. Short reads generated from these samples...

    3752 days ago

  • Download blasr 1.3 version

    DOWNLOAD LINK: https://github.com/BioInf-Wuerzbu...nning "OPERA-LG_v2.0.5/bin/preprocess_reads.pl" and have the following er...18] Finding the SA coordinates of the reads using BWA aln...[Thu Jun 14 1...t; FALCON-Unzip-Scaff.bamMapping long-reads using blasr.../home/urbe/Tool...

    2113 days ago

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  • Genome Assembly Tools and Software - PART2 !!

    The genome assemblers generally take a file of short sequence reads and a file of quality-value a...xpression levels from RNA-Seq reads. MaLTA – Transcriptome...ose contigs can be individual reads from a subset of the paired-r...ended for Illumina sequencing reads. Quake adopts the k-mer error...

    2648 days ago

  • Awesome perl frameworks, libraries and software - PART 4

    tjstein/php5-fpm-munin-plugins - A set of Munin plugin...hetop is a console-based tool for monitoring the threads and overall performance of a...ut-nginx-module - This is a nginx module that reads HTTP POST and PUT request bod...

    2456 days ago

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  • Assemble short reads http://ged.msu.edu/angus/tutorials/short-read-assembly.html #Tutorial #ABySS #Bacteria #Reads #Assembly #Genomics #NGS

    3583 days ago

  • Live webinar on long reads! http://programs.pacificbiosciences.com/l/1652/2014-06-16/2w46dr #PacBio #LongReads #NGS #Omics #Seq

    3564 days ago

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  • Genetics, epigenetics and disease

    Royal Society GlaxoSmithKline Prize Lecture given by Professor Adrian Bird CBE FMedSci F...he autism spectrum disorder Rett syndrome is caused by loss of a protein that reads methylated CG and affects the...

    3835 days ago

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  • Quick next generation sequencing (NGS) terms definition

    fragment size: the Illumina WGS protocol generates paired-end reads from both ends of longer fragments. The lengths of these fragments are assumed to be sampled from a normal distribution. Therefore, in the absence of structural variants, mapping locations of the paired ends span within an i...

    Tags: Quick, NGS, definition, fragment size, concordant reads, discordant reads, split reads, read depth

    2484 days ago