Results for "consensus"
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Comment on "Nanopolis: polish a genome assembly"
...mtools index reads.sorted.bam python nanopolish_makerange.py draft.fa | parallel --results nanopolish.results -P 8 \ nanopolish variants --consensus -o polished.{1}.vcf -w {1} -r...2084 days ago
Comment on "Run miniasm assembler on nanopore reads !"
...ds) Minimap and miniasm are ultrafast tools for (i) mapping and (ii) assembly. Designed for long, noisy reads, they do not have a correction or consensus step, and therefore the resul...2160 days ago
Comment on "Bioinformatics Algorithm Demonstrations and Tutorials"
The FindMotif.pl program uses position-specific scoring matrices to search for sequences similar to a consensus sequence. Find more at http://www.people.vcu.edu/~elhaij/IntroBioinf/Notes/PSSM-Perl.html3621 days ago
Comment on "Bio++ : C Language libraries for your biological need"
...(Simulate data sets according to a phylogenetic tree and an evolutionary model).bppAncestor (Reconstruct ancestral sequences).bppConsense (Build consensus trees and compute bootstrap v...3811 days ago
