Results for "conservation"
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Ensembl comparative genomics resources
...cible analysis of chordate genome data. Ensembl computes pairwise and multiple whole-genome alignments from which large-scale synteny, per-base conservation scores and constrained elemen...2979 days ago
- ...mpared to taxonomically related organisms. DarkHorse is configurable for varying degrees of phylogenetic granularity and protein sequence conservation. Users should consult the&nbs...
2864 days ago
- ...th search by signal, content and homology (protein and cDNA sequences) methods will be employed in order to improve the ab initio results. Weak conservation of Start codons will lead to...
2799 days ago
Method in Comparative genomics !!
...cation of protein-coding genes based on their patterns of nucleotide conservation across related species. We ob...iterature on computational motif discovery. Based on the genome-wide conservation patterns of known motifs, we...2724 days ago
- ...s between two or more DNA sequences. It can be used to identify and analyse regions of similarity and difference between genomes and to explore conservation of synteny, in the context of...
2788 days ago
Mulan: MUltiple sequence Local AligNment and conservation visualization tool
...bsp;tba tools to align either "draft" or "finished" quality sequences. Mulan provides a dynamic graphical interface to align and visualize conservation profiles for evolutionarily d...2471 days ago
- ...y predicting pairwise orthology relations based on gene neighborhood conservation. Analyses on simulated and re...to orthology detection, OrthoGNC can be employed to investigate the conservation of genomic context among pote...
2354 days ago
UCSC SARS-CoV-2 Genome Browser
...is an adaptation of our popular genome-browser visualization tool for this virus, containing many annotation tracks and new features, including conservation with similar viruses, immune...840 days ago
Mulan: Multiple-sequence local alignment and visualization for studying function and evolution
...ver evolutionary time. Mulan brings together several novel algorithms: the TBA multi-aligner program for rapid identification of local sequence conservation, and the multiTF program for...2071 days ago
G-NEST: The Gene NEighborhood Scoring Tool
The Gene NEighborhood Scoring Tool (G-NEST) combines genomic location, gene expression, and evolutionary sequence conservation data to score putative gene neighborhoods across all window sizes. Primary author of final code = William F. Martin. Example data files are in the separate repository.1308 days ago
