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...enome coordinates between assemblies. It’s not a program for aligning sequences to reference genome. We do not recommend using CrossMap to convert genome coordinates between sp...2998 days ago
- ...ows platforms. Currently CSBB provides 13 modules focused on analytical tasks like performing upper-quantile normalization on expression data or convert genome wide gene expression t...
2857 days ago
- ...tween assemblies. It’s not a program for aligning sequences to reference genome. We do not recommend using CrossMap to convert genome coordinates between sp...
2789 days ago
- OrganellarGenomeDRAW is dedicated to convert genetic information stored in GenBank entries to graphical maps. The input text file has to be in GenBank flat file format, whereas t...
2809 days ago
- Collections of few handy tools for bioinformatician http://molbiol-tools.ca/Convert.htm
2796 days ago
WGS Celera Assembler version 8.3rc2
...r 10 11:41 computeCoverageStat-rwxrwxr-x 1 urbe urbe 9,8K Apr 10 11:41 convert-fasta-to-v2.pl-rwxrwxr-x 1 urbe urbe 48K Apr 10 11:41 convertOverlap-rwxrwxr-x 1 urbe urbe...2572 days ago
miniasm: very fast OLC-based de novo assembler for noisy long reads
...Sw5 -L100 -m0 -t8 reads.fq reads.fq | gzip -1 > reads.paf.gz Then we can assemble miniasm -f reads.fq reads.paf.gz > reads.gfa Convert GFA to FASTA: awk '/^S/{pr...2341 days ago
CrossMap: a program for convenient conversion of genome coordinates
...enome coordinates between assemblies. It’s not a program for aligning sequences to reference genome. We do not recommend using CrossMap to convert genome coordinates between sp...2156 days ago
BlobToolKit: A toolkit for genome assembly QC
...n and filtering of preliminary or published genomic datasets even for highly fragmented assemblies. BlobTools2 is a command-line program to convert assemblies and analysis resul...1525 days ago
Pandoc: a universal document converter
If you need to convert files from one markup format into another, pandoc is your swiss-army knife. Pandoc can convert almost all formats https://pandoc.org/index.html1036 days ago
