Results for "correction"
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...or raw sequence quality analysis and control with few of process for reporting reads quality statistical details, trimming, filtering, and error correction. Please bookmarks them for th...3223 days ago
- ...onfig generates a configuration file that notably specifies the average insert size of the mate-pair library preprocess allows the detection and correction of chimerae, the estimation o...
2842 days ago
- ...nted. Finally, dedicated cohort-based statistics is incorporated with correction for covariates that influence...he probability to be a breakpoint gene. In addition, multiple testing correction is integrated to reveal recur...
2143 days ago
LoRDEC: a hybrid error correction program for long, PacBio reads
...in PacBio reads include many insertions and deletions, and comparatively less substitutions. LoRDEC can correct errors of all these types. After correction, a larger portion of the sequ...2571 days ago
A Post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs
...t enables errors in the consensus sequence to be corrected by iteratively mapping reads to the current assembly. An improved version, especially correction Pacfic Bioscience assemblies...2539 days ago
Pollux: platform independent error correction of single and mixed genomes
Pollux: General-purpose error corrector that corrects errors introduced by Illumina, Ion Torrent, and Roche 454 sequencing technologies and can be applied to single- or m...2532 days ago
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
...tps://github.com/mariokostelac/ra-integrate).Ra attempts to create de novo assemblies from raw nanopore and PacBio reads without requiring error correction, for which a highly sensitive...2513 days ago
Meraculous: De Novo Genome Assembly with Short Paired-End Reads
...e subgraph of the k-mer (deBruijn) graph of oligonucleotides with unique high quality extensions in the dataset, avoiding an explicit error correction step as used in other short-r...2360 days ago
QuorUM: An Error Corrector for Illumina Reads
...g. for mapping or assembly) easier. Here we use the term “error correction” to denote the reductio...vidual bases and trimming of unusable sequence. We developed an error correction software called QuorUM. QuorU...2359 days ago
ONT assembly and Illumina polishing pipeline
...nbsp;racon (optional). Map a paired-end Illumina dataset onto the contigs obtained in the previous steps using BWA mem. Perform correction of contigs using pilon&n...2344 days ago
