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List of generic simulation software/tools/resource with brief description and homepage !!!
...e.htmlMendel's Accountant Mendel's Accountant (MENDEL) is an advanced numerical simulation program for modeling genetic change over time and was developed collaboratively by Sanford, B...3721 days ago
List of In-silico Binding Site Prediction Tools
...f ligand-binding sites have been developed in recent decades. Here we pr...ers of residues. PocketQuery was developed by David Koes from the Camach...e prediction algorithms. We have developed a new method PocketDepth, for...vol/mcvol This program was developed to integrate the molecular vo...3728 days ago
Next generation sequencing in R or bioconductor environment
...s a ranked list of genomic regions as input and outputs short DNA sequences that are overrepresented in some part of the list. The algorithm was developed for detecting transcription f...3609 days ago
Commercial and public next-gen-seq (NGS) software
...ignment Program) for mRNA and EST Sequences. Developed by Thomas Wu and Colin Watana...on, and visualization tools. Version 3.0 was developed by Stefan Kurtz, Adam Phillip...Need about 20-25X coverage and paired reads. Developed by Daniel Zerbino and Ewan Bi...3503 days ago
Software packages for next gen sequence analysis
...ram) for mRNA and EST Sequences. Developed by Thomas Wu and Colin Watana...alization tools. Version 3.0 was developed by Stefan Kurtz, Adam Phillip...carry out post-analysis. ZOOM is developed to be highly accurate, flexib...NA-Seq Analysis Tools. RNASAT is developed and maintained by Hui Jiang a...3227 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...atabases (RefSeq, UCSC, SIFT, Polyphen etc.) with additional in-house developed sources (Non-B DB, PolyBrowse...Genome Annotation and Distributed Variant Interpretation Server, web developed applications for variant anno...2893 days ago
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